RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CAND2O75155 1236 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 MTA2O94776 668 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 VTNP04004 478 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 RB1P06400 928 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 IVLP07476 585 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 NAMPTP43490 491 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 LIG4P49917 911 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 PDE6CP51160 858 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 AP3M2P53677 418 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 TMEM62Q0P6H9 643 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 ADAM15Q13444 863 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 MTMR3Q13615 1198 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 IER5Q5VY09 327 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 TCP11Q8WWU5 503 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 FNBP1Q96RU3 617 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 GPR88Q9GZN0 384 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 RAB17Q9H0T7 212 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 IRF2BPLQ9H1B7 796 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 RAB20Q9NX57 234 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 UVRAGQ9P2Y5 699 aa13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 DMGDHQ9UI17 866 aaKnown RBP13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 AJAP1Q9UKB5 411 aaPredicted RBP13.75□□□□□ -0.21
SMARCB1-203ENST00000407082 FAM187AA6NFU0 413 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 H3BQF6 201 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 PIGRP01833 764 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 FTLP02792 175 aaPredicted RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 MYBL1P10243 752 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 AVPR2P30518 371 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 USP8P40818 1118 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 MRPS6P82932 125 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 CDC42EP1Q00587 391 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 GCNT1Q02742 428 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 GUCY2DQ02846 1103 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 SURF1Q15526 300 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 RBM23Q86U06 439 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 RHPN2Q8IUC4 686 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 PPM1KQ8N3J5 372 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 MAIP1Q8WWC4 291 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 PRPF31Q8WWY3 499 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 SHC3Q92529 594 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 POLR3FQ9H1D9 316 aaPredicted RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 GINS2Q9Y248 185 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 UTP11Q9Y3A2 253 aaKnown RBP13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
SMARCB1-203ENST00000407082 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 ASAP2O43150 1006 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 RNF40O75150 1001 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 CHRNA1P02708 482 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 ARL2P36404 184 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 NLRP11P59045 1033 aaKnown RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 DLG4P78352 724 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 SIGLEC14Q08ET2 396 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 PSMD6Q15008 389 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 KIZQ2M2Z5 673 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 SPDYCQ5MJ68 293 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 SEL1L2Q5TEA6 688 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 TRIM72Q6ZMU5 477 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 FAM76AQ8TAV0 307 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 CELF4Q9BZC1 486 aaKnown RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 LCMT1Q9UIC8 334 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 NOC2LQ9Y3T9 749 aaKnown RBP13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 RWDD3Q9Y3V2 267 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 CDY2AQ9Y6F7 541 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 STYXL1Q9Y6J8 313 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 C5orf42Q9H799 3197 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 CACNA1HO95180 2353 aa13.73□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA8IPA6NC78 632 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA6L10A6NI86 522 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 C5orf67F2Z3F1 127 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 K7ERI5 159 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms