RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 GPC5P78333 572 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 INCA1Q0VD86 236 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 IKBKEQ14164 716 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 TIGD5Q53EQ6 642 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 SGO2Q562F6 1265 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 LLGL2Q6P1M3 1020 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 DENND1BQ6P3S1 775 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.94□□□□□ -1.785e-9■■■□□ 16.5
RTN4-208ENST00000404909 MMS22LQ6ZRQ5 1243 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 TMCO2Q7Z6W1 182 aaPredicted RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 TTC39CQ8N584 583 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 TRIM58Q8NG06 486 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 UBA3Q8TBC4 463 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 KBTBD7Q8WVZ9 684 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 FAXDC2Q96IV6 333 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 NAPGQ99747 312 aaPredicted RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 ISCUQ9H1K1 167 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 CDH23Q9H251 3354 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 SYNCQ9H7C4 482 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 GDAP2Q9NXN4 497 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 ADAM22Q9P0K1 906 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 HCSTQ9UBK5 93 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 DNAJB4Q9UDY4 337 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 CNOT8Q9UFF9 292 aaKnown RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 PRKAG2Q9UGJ0 569 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 NENFQ9UMX5 172 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 MYH10P35580 1976 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 PIK3R2O00459 728 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 KIF4AO95239 1232 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 PARNO95453 639 aaKnown RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 TIMP1P01033 207 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 CXCL10P02778 98 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 TUBB4AP04350 444 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 CYP1A1P04798 512 aaPredicted RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 CCDC130P13994 396 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 RRM1P23921 792 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 ADORA2BP29275 332 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 PBX3P40426 434 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 BCAR1P56945 870 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 NOMO3P69849 1222 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 CCDC142Q17RM4 750 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 ZNF662Q6ZS27 426 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 DAAM2Q86T65 1068 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 RNF10Q8N5U6 811 aaKnown RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 TMEM35BQ8NCS4 154 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 RFFLQ8WZ73 363 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 DDX27Q96GQ7 796 aaKnown RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 NUP85Q9BW27 656 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 KANSL3Q9P2N6 904 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 TSPAN16Q9UKR8 245 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 INTUQ9ULD6 942 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 PACSIN2Q9UNF0 486 aaPredicted RBP3.94□□□□□ -1.78
RTN4-208ENST00000404909 STXBP5LQ9Y2K9 1186 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 HYOU1Q9Y4L1 999 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 NME7Q9Y5B8 376 aa3.94□□□□□ -1.78
RTN4-208ENST00000404909 NT5C1B-RDH14C9J2C7 533 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 NCK2O43639 380 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ATP2C2O75185 946 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TADA2AO75478 443 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MICAL2O94851 1124 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ATP1A1P05023 1023 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 VDRP11473 427 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CENPCQ03188 943 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GOLGA7BQ2TAP0 167 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PPP1R26Q5T8A7 1209 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 CYP4A22Q5TCH4 519 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TRIM72Q6ZMU5 477 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 OTOP2Q7RTS6 562 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 OSTM1Q86WC4 334 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ERICH1Q86X53 443 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MCOLN2Q8IZK6 566 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TOP6BLQ8N6T0 577 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 BTBD6Q96KE9 485 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 DDX43Q9NXZ2 648 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 COG5Q9UP83 839 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GRID2IPA4D2P6 1211 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ZBBXA8MT70 800 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 O00370 1275 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 SRGAP2O75044 1071 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GJB6O95452 261 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ODC1P11926 461 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CXCR5P32302 372 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 RGS7P49802 495 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MESDQ14696 234 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CNGA2Q16280 664 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 IFI16Q16666 785 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 SPOUT1Q5T280 376 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 LIN9Q5TKA1 542 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CNKSR3Q6P9H4 555 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 DCLRE1AQ6PJP8 1040 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 UNC93AQ86WB7 457 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CEP57Q86XR8 500 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TMEM199Q8N511 208 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 WDTC1Q8N5D0 677 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TPCN2Q8NHX9 752 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ZNF564Q8TBZ8 553 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 SLC2A14Q8TDB8 520 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TNIP3Q96KP6 325 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms