RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 TMEM176AQ96HP8 235 aa16.79■□□□□ 0.28
CDPF1-204ENST00000404744 ACBD6Q9BR61 282 aa16.79■□□□□ 0.28
CDPF1-204ENST00000404744 ZBP1Q9H171 429 aa16.79■□□□□ 0.28
CDPF1-204ENST00000404744 TLR9Q9NR96 1032 aa16.79■□□□□ 0.28
CDPF1-204ENST00000404744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDPF1-204ENST00000404744 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
CDPF1-204ENST00000404744 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 LRRC53A6NM62 1247 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 GFPT2O94808 682 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 CXCL14O95715 111 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 LMO2P25791 158 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 JAM2P57087 298 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 PTK2Q05397 1052 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 PRSS55Q6UWB4 352 aaPredicted RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 GPR65Q8IYL9 337 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 UBR7Q8N806 425 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 HEXIM2Q96MH2 286 aaKnown RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
CDPF1-204ENST00000404744 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 ZNHIT6Q9NWK9 470 aaKnown RBP16.78■□□□□ 0.28
CDPF1-204ENST00000404744 GRM6O15303 877 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 CYP26A1O43174 497 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 CSPG5O95196 566 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 CD19P15391 556 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 FERP16591 822 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
CDPF1-204ENST00000404744 TBX2Q13207 712 aaPredicted RBP16.77■□□□□ 0.28
CDPF1-204ENST00000404744 ORC1Q13415 861 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 SMC1AQ14683 1233 aaKnown RBP16.77■□□□□ 0.28
CDPF1-204ENST00000404744 ASIC2Q16515 512 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 PDE12Q6L8Q7 609 aaKnown RBP16.77■□□□□ 0.28
CDPF1-204ENST00000404744 ACOT1Q86TX2 421 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 FAM71AQ8IYT1 594 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 DCP1BQ8IZD4 617 aaKnown RBP16.77■□□□□ 0.28
CDPF1-204ENST00000404744 BAP1Q92560 729 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 ZNF576Q9H609 170 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 CNTN6Q9UQ52 1028 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 BACE2Q9Y5Z0 518 aa16.77■□□□□ 0.28
CDPF1-204ENST00000404744 SZT2Q5T011 3432 aa16.77■□□□□ 0.27
CDPF1-204ENST00000404744 PAEPP09466 180 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 PNMA6AP0CW24 399 aaPredicted RBP16.76■□□□□ 0.27
CDPF1-204ENST00000404744 CPB1P15086 417 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
CDPF1-204ENST00000404744 RAD23BP54727 409 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 ADKP55263 362 aaKnown RBP16.76■□□□□ 0.27
CDPF1-204ENST00000404744 ARPP19P56211 112 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 ERVFC1P60507 584 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 ARID5AQ03989 594 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 INTS6LQ5JSJ4 861 aaKnown RBP16.76■□□□□ 0.27
CDPF1-204ENST00000404744 PLPP4Q5VZY2 271 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 OR8K1Q8NGG5 319 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 WHAMMQ8TF30 809 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 HMGXB4Q9UGU5 601 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 KIAA1257Q9ULG3 409 aa16.76■□□□□ 0.27
CDPF1-204ENST00000404744 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.75■□□□□ 0.27
CDPF1-204ENST00000404744 RNF225M0QZC1 329 aaPredicted RBP16.75■□□□□ 0.27
CDPF1-204ENST00000404744 HCRTO43612 131 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 MFAP3LO75121 409 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 VDRP11473 427 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 GNA15P30679 374 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
CDPF1-204ENST00000404744 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 MAPRE1Q15691 268 aaKnown RBP16.75■□□□□ 0.27
CDPF1-204ENST00000404744 PTPROQ16827 1216 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 CRYBG2Q8N1P7 616 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 B3GALNT2Q8NCR0 500 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 TWNKQ96RR1 684 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 FNIP2Q9P278 1114 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 THAP12O43422 761 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 MED7O43513 233 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 DNAJB1P25685 340 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 CLCN1P35523 988 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 PDE6CP51160 858 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 MDH1BQ5I0G3 518 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 GPIHBP1Q8IV16 184 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 GLYCTKQ8IVS8 523 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 OR10T2Q8NGX3 314 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 SYN2Q92777 582 aaPredicted RBP16.75■□□□□ 0.27
CDPF1-204ENST00000404744 RTP3Q9BQQ7 232 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 ZCWPW1Q9H0M4 648 aa16.75■□□□□ 0.27
CDPF1-204ENST00000404744 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms