RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PHF13Q86YI8 300 aaPredicted RBP20.93■□□□□ 0.94
CCDC47-202ENST00000403162 AGGF1Q8N302 714 aaeCLIP20.93■□□□□ 0.94
CCDC47-202ENST00000403162 RDM1Q8NG50 284 aa20.93■□□□□ 0.94
CCDC47-202ENST00000403162 C11orf70Q9BRQ4 267 aa20.93■□□□□ 0.94
CCDC47-202ENST00000403162 FAM213AQ9BRX8 229 aa20.93■□□□□ 0.94
CCDC47-202ENST00000403162 KIAA1586Q9HCI6 787 aa20.93■□□□□ 0.94
CCDC47-202ENST00000403162 SLC45A1Q9Y2W3 748 aa20.93■□□□□ 0.94
CCDC47-202ENST00000403162 ATP9AO75110 1047 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 SLC10A3P09131 477 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 PDK4Q16654 411 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 PPP1R2P3Q6NXS1 205 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 INPP5DQ92835 1189 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 TMEM237Q96Q45 408 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 PTPN18Q99952 460 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 PAIP2Q9BPZ3 127 aaKnown RBP20.92■□□□□ 0.94
CCDC47-202ENST00000403162 TRABDQ9H4I3 376 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 PPCSQ9HAB8 311 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 CHKBQ9Y259 395 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 HGSO14964 777 aaPredicted RBP20.92■□□□□ 0.94
CCDC47-202ENST00000403162 SPAG7O75391 227 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 DCTN3O75935 186 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 EIF2AK2P19525 551 aaKnown RBP20.92■□□□□ 0.94
CCDC47-202ENST00000403162 ACO1P21399 889 aaKnown RBP20.92■□□□□ 0.94
CCDC47-202ENST00000403162 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
CCDC47-202ENST00000403162 DNAJC3Q13217 504 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 RASA2Q15283 850 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 ZACNQ401N2 412 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 ABRAQ8N0Z2 381 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 ERP27Q96DN0 273 aa20.92■□□□□ 0.94
CCDC47-202ENST00000403162 A0A0G2JMZ2 1700 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 EDF1O60869 148 aaKnown RBP20.91■□□□□ 0.94
CCDC47-202ENST00000403162 CNMDO75829 334 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 HLA-DRAP01903 254 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 C1QBPQ07021 282 aaKnown RBP20.91■□□□□ 0.94
CCDC47-202ENST00000403162 PSMD6Q15008 389 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 SPDYAQ5MJ70 313 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 PAXIP1Q6ZW49 1069 aaPredicted RBP20.91■□□□□ 0.94
CCDC47-202ENST00000403162 VSIG1Q86XK7 387 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 RCOR2Q8IZ40 523 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 FAXDC2Q96IV6 333 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 RBM41Q96IZ5 413 aaKnown RBP20.91■□□□□ 0.94
CCDC47-202ENST00000403162 LRRC37BQ96QE4 947 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 TAAR1Q96RJ0 339 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 SPATC1LQ9H0A9 340 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 TXNRD2Q9NNW7 524 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 RBPJLQ9UBG7 517 aa20.91■□□□□ 0.94
CCDC47-202ENST00000403162 MANSC4A6NHS7 340 aaPredicted RBP20.9■□□□□ 0.94
CCDC47-202ENST00000403162 EXTL3O43909 919 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 RTP1P59025 263 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ANKRD20A2Q5SQ80 823 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ANKRD20A1Q5TYW2 823 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ANKRD20A3Q5VUR7 823 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 KIRREL3Q8IZU9 778 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ALLCQ8N6M5 410 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 SMC6Q96SB8 1091 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 DNPEPQ9ULA0 475 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.9■□□□□ 0.94
CCDC47-202ENST00000403162 C4BPAP04003 597 aaKnown RBP20.9■□□□□ 0.94
CCDC47-202ENST00000403162 CFHP08603 1231 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ALDH3A1P30838 453 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 PSEN1P49768 467 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 GRM1Q13255 1194 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 MORF4L2Q15014 288 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 PKN2Q16513 984 aaKnown RBP20.9■□□□□ 0.94
CCDC47-202ENST00000403162 RIOX2Q8IUF8 465 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 FAM84AQ96KN4 292 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 TRIM6Q9C030 488 aaPredicted RBP20.9■□□□□ 0.94
CCDC47-202ENST00000403162 ACAD9Q9H845 621 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 USTQ9Y2C2 406 aa20.9■□□□□ 0.94
CCDC47-202ENST00000403162 TESPA1A2RU30 521 aaPredicted RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 NDC80O14777 642 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 LIN7AO14910 233 aaPredicted RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 TLR3O15455 904 aaKnown RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 PECAM1P16284 738 aaPredicted RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 GJC1P36383 396 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 PIK3CAP42336 1068 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 SOX10P56693 466 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 RPS6P62753 249 aaKnown RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 TDRD10Q5VZ19 366 aaKnown RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 TAS1R3Q7RTX0 852 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 GLIS1Q8NBF1 620 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 FEZF2Q8TBJ5 459 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 CEP170P1Q96L14 293 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 SLITRK1Q96PX8 696 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 SENP7Q9BQF6 1050 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 PARVAQ9NVD7 372 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 IP6K2Q9UHH9 426 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 SLC24A2Q9UI40 661 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 GRID1Q9ULK0 1009 aa20.89■□□□□ 0.94
CCDC47-202ENST00000403162 DRG1Q9Y295 367 aaKnown RBP20.89■□□□□ 0.94
CCDC47-202ENST00000403162 FAM155AB1AL88 458 aaPredicted RBP20.89■□□□□ 0.93
CCDC47-202ENST00000403162 TJP3O95049 919 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 MYCLP12524 364 aaPredicted RBP20.89■□□□□ 0.93
CCDC47-202ENST00000403162 PAX7P23759 505 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 GNA15P30679 374 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 SSR1P43307 286 aaKnown RBP20.89■□□□□ 0.93
CCDC47-202ENST00000403162 ARSEP51690 589 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 MCL1Q07820 350 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 CUL2Q13617 745 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 NCAPG2Q86XI2 1143 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms