RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 PASD1Q8IV76 773 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 ZBED8Q8IZ13 594 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 C4orf33Q8N1A6 199 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 SUPT20HQ8NEM7 779 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 RMDN3Q96TC7 470 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
FAM47DP-201ENST00000402340 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ABLIM1O14639 778 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 TSHRP16473 764 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 OGDHQ02218 1023 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 TAZQ16635 292 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 FRMD8P1Q9BZ68 369 aaPredicted RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 NUB1Q9Y5A7 615 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 TM9SF1O15321 606 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 MAPK6Q16659 721 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 LVRNQ6Q4G3 990 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 CLNKQ7Z7G1 428 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 CGRRF1Q99675 332 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ZNF341Q9BYN7 854 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 VPS11Q9H270 941 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 ACSS3Q9H6R3 686 aa13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 TRPC5Q9UL62 973 aaPredicted RBP13.13□□□□□ -0.31
FAM47DP-201ENST00000402340 DNAJC6O75061 913 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 IL1BP01584 269 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 KRT1P04264 644 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 TNNI1P19237 187 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 CALB1P05937 261 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 KRT4P19013 534 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 GLRA2P23416 452 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 LIG4P49917 911 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 TAP1Q03518 808 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 TAF11Q15544 211 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 TXNRD3NBQ6F5E7 133 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 F8VP50 259 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 RGS20O76081 388 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 CBX6O95503 412 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ATP6V1C1P21283 382 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 EPHB2P29323 1055 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 KAZNQ674X7 775 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 DCAKDQ8WVC6 231 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 BICD1Q96G01 975 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 MIPEPQ99797 713 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 ZNF518BQ9C0D4 1074 aa13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
FAM47DP-201ENST00000402340 FAM155BO75949 473 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 HIF1AQ16665 826 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 HHATQ5VTY9 493 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 ABHD15Q6UXT9 468 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 SH2D5Q6ZV89 423 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 PPIL6Q8IXY8 311 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 FBXO41Q8TF61 875 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 CPT1BQ92523 772 aa13.11□□□□□ -0.31
FAM47DP-201ENST00000402340 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms