RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 GDF7Q7Z4P5 450 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 DPP9Q86TI2 863 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 FAM83AQ86UY5 434 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 MORC1Q86VD1 984 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 COL23A1Q86Y22 540 aaPredicted RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 SLC35B2Q8TB61 432 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 MORC4Q8TE76 937 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 KBTBD7Q8WVZ9 684 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 NT5C1BQ96P26 610 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 MPHOSPH6Q99547 160 aaKnown RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 COLEC11Q9BWP8 271 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 CHMP4AQ9BY43 222 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 SEMA4GQ9NTN9 838 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 RLIMQ9NVW2 624 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 ZNF70Q9UC06 446 aaPredicted RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 ABCF2Q9UG63 623 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 ZDHHC8Q9ULC8 765 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 TPCN1Q9ULQ1 816 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 FAM50BQ9Y247 325 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 RUVBL1Q9Y265 456 aaKnown RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 MED16Q9Y2X0 877 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 ACTL7AQ9Y615 435 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 WDR91A4D1P6 747 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 CFAP69A5D8W1 941 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 CXorf49A8MYA2 514 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 RASA4BC9J798 803 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 H3BUI4 141 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 IFRD1O00458 451 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 RASA4O43374 803 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 MGEA5O60502 916 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PQBP1O60828 265 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 SLC43A1O75387 559 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 SPDEFO95238 335 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 ESRRBO95718 433 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 LDHAP00338 332 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 RAP2AP10114 183 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 EGR2P11161 476 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 MTHFD1P11586 935 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 NPR1P16066 1061 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 ZKSCAN1P17029 563 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 HOXB6P17509 224 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 SERPINB3P29508 390 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PIK3CBP42338 1070 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 RAP2BP61225 183 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 TCF15Q12870 199 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 OS9Q13438 667 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 BMT2Q1RMZ1 405 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 DGKKQ5KSL6 1271 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 AFMIDQ63HM1 303 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 DRICH1Q6PGQ1 229 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 PPP1R3BQ86XI6 285 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PDSS2Q86YH6 399 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 CPEB3Q8NE35 698 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 OR10H5Q8NGA6 315 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 TFAP2CQ92754 450 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 SUCLG2Q96I99 432 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PHACTR3Q96KR7 559 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PSMD1Q99460 953 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 C11orf54Q9H0W9 315 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 NLRC4Q9NPP4 1024 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 GNL3LQ9NVN8 582 aaKnown RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 FEZ2Q9UHY8 353 aaPredicted RBP3.42□□□□□ -1.86
CD47-203ENST00000398258 TAGLN3Q9UI15 199 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PADI4Q9UM07 663 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PCDHGB6Q9Y5F9 930 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 PNPLA7Q6ZV29 1317 aa3.42□□□□□ -1.86
CD47-203ENST00000398258 A0A1W2PPL8 197 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 MARCH11A6NNE9 402 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 TBKBP1A7MCY6 615 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 RNASET2O00584 256 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 GRM6O15303 877 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 ANXA1P04083 346 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 CD1AP06126 327 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 SNRPA1P09661 255 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 SMARCA1P28370 1054 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 SLC6A4P31645 630 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 PIK3CGP48736 1102 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 RNASE9P60153 205 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 SRSF4Q08170 494 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 IFIT5Q13325 482 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 KIF22Q14807 665 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 ATP2B3Q16720 1220 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 EFCAB12Q6NXP0 572 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 ARHGEF25Q86VW2 580 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 FAM186BQ8IYM0 893 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 SLC44A3Q8N4M1 653 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 DEPTORQ8TB45 409 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 BRIX1Q8TDN6 353 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 ZBTB9Q96C00 473 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 NMD3Q96D46 503 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 SGCZQ96LD1 299 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 MYD88Q99836 296 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 MYOCQ99972 504 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 MRI1Q9BV20 369 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 TRIM54Q9BYV2 358 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 UNKQ9C0B0 810 aaKnown RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 MYH16Q9H6N6 1097 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 GPR35Q9HC97 309 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 PIH1D1Q9NWS0 290 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms