RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CUL2Q13617 745 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RASA2Q15283 850 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TRABD2AQ86V40 505 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HEXIM2Q96MH2 286 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BTBD10Q9BSF8 475 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 C12orf65Q9H3J6 166 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 EBF2Q9HAK2 575 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZC3H7BQ9UGR2 993 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC24A2Q9UI40 661 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 LRCH1Q9Y2L9 728 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BCL9LQ86UU0 1499 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MYH7P12883 1935 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PYGBP11216 843 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FOXN2P32314 431 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MED21Q13503 144 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TFDP2Q14188 446 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TKFCQ3LXA3 575 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PPCSQ9HAB8 311 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ARHGEF3Q9NR81 526 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SMYD2Q9NRG4 433 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 IVNS1ABPQ9Y6Y0 642 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NFIBO00712 420 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MED7O43513 233 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TAS2R40P59535 323 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ASPHQ12797 758 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PDK4Q16654 411 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAM102AQ5T9C2 384 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPOCD1Q6ZMY3 1216 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 LRRC74BQ6ZQY2 392 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NME8Q8N427 588 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TTC16Q8NEE8 873 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HERC5Q9UII4 1024 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 A6NJR5 290 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FCHO1O14526 889 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KCNN4O15554 427 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 EDF1O60869 148 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BCAR1P56945 870 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 POU5F1Q01860 360 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 STX3Q13277 289 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DYNC1I2Q13409 638 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TRIP10Q15642 601 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC1A5Q15758 541 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TFDP3Q5H9I0 405 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MROH9Q5TGP6 573 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NDUFAF2Q8N183 169 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CCNYQ8ND76 341 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PPP1R16BQ96T49 567 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 VPS11Q9H270 941 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 STRIP2Q9ULQ0 834 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CREB3O43889 395 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DGAT1O75907 488 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ADRA2BP18089 450 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC34A1Q06495 639 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF667Q5HYK9 610 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SCYL1Q96KG9 808 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FBXO6Q9NRD1 293 aaPredicted RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RNF146Q9NTX7 359 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ACTL7BQ9Y614 415 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC4A7Q9Y6M7 1214 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 F8VP50 259 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP3A4P08684 503 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ATP6V1C1P21283 382 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MUTP22033 750 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 VCPP55072 806 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RPS6P62753 249 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPIRE1Q08AE8 756 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BLMHQ13867 455 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SEC14L1Q92503 715 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DDX50Q9BQ39 737 aaKnown RBP11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TIPINQ9BVW5 301 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CHKBQ9Y259 395 aa11.65□□□□□ -0.54
CSGALNACT1-202ENST00000397998 E2F8A0AVK6 867 aa11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 SNRPAP09012 282 aaKnown RBP11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 P4HA1P13674 534 aa11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 SH3BGRP55822 239 aaPredicted RBP11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 MMEL1Q495T6 779 aa11.65□□□□□ -0.55
CSGALNACT1-202ENST00000397998 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms