RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TMEM8AQ9HCN3 771 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 CGNQ9P2M7 1197 aaKnown RBP7.31□□□□□ -1.24
SMCO1-201ENST00000397537 DNAJB9Q9UBS3 223 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 NAALADL1Q9UQQ1 740 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 FAM169AQ9Y6X4 670 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 NINLQ9Y2I6 1382 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 MROH1Q8NDA8 1641 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 CAMTA1Q9Y6Y1 1673 aa7.31□□□□□ -1.24
SMCO1-201ENST00000397537 CDC42BPAQ5VT25 1732 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ERVK-7P63135 1459 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 DCDC2BA2VCK2 349 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 CASQ2O14958 399 aaPredicted RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ASAP2O43150 1006 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ZBTB14O43829 449 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 CAMTA2O94983 1202 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ITGA2BP08514 1039 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 NEFHP12036 1026 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 EPHA1P21709 976 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 MAOBP27338 520 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ARL3P36405 182 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 EIF2DP41214 584 aaKnown RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 GPC3P51654 580 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 RPS16P62249 146 aaKnown RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 TUSC3Q13454 348 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ATG16L1Q676U5 607 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 KLHDC10Q6PID8 442 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ZZZ3Q8IYH5 903 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 SCML4Q8N228 414 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 USHBP1Q8N6Y0 703 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ANKRD49Q8WVL7 239 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 SHC3Q92529 594 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 HSPH1Q92598 858 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 TBC1D5Q92609 795 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 VPS33AQ96AX1 596 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 VPS39Q96JC1 886 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 TSEN34Q9BSV6 310 aaKnown RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ANKRD2Q9GZV1 360 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 ABHD16BQ9H3Z7 469 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 TAF1DQ9H5J8 278 aaPredicted RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 THAP9Q9H5L6 903 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 NECTIN3Q9NQS3 549 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 UBA2Q9UBT2 640 aaPredicted RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 AFF4Q9UHB7 1163 aaKnown RBP7.3□□□□□ -1.24
SMCO1-201ENST00000397537 AP1M2Q9Y6Q5 423 aa7.3□□□□□ -1.24
SMCO1-201ENST00000397537 KIAA1107Q9UPP5 1409 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TMEM2Q9UHN6 1383 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PRSS38A1L453 326 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CCDC78A2IDD5 438 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 RGSL1A5PLK6 1076 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 H0Y8X5 98 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 H0YAE9 185 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SMPD2O60906 423 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CLEC3BP05452 202 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 DLDP09622 509 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PTPN2P17706 415 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 EIF2AK2P19525 551 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 KRT2P35908 639 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 GGCXP38435 758 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CDK17Q00537 523 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CYP4A11Q02928 519 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ZBTB41Q5SVQ8 909 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 RRAGBQ5VZM2 374 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 NUTM2GQ5VZR2 741 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 C17orf53Q8N3J3 647 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ETNPPLQ8TBG4 499 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 MAML1Q92585 1016 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SNX22Q96L94 193 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 C1orf74Q96LT6 269 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 KCNJ15Q99712 375 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TWSG1Q9GZX9 223 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ADAM7Q9H2U9 754 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TBC1D14Q9P2M4 693 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CPA4Q9UI42 421 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 RNF112Q9ULX5 631 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TRIM17Q9Y577 477 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CFAP20Q9Y6A4 193 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 BRWD3Q6RI45 1802 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SPHKAPQ2M3C7 1700 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CFAP65Q6ZU64 1925 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 A8MXE2 369 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 RNF225M0QZC1 329 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TAF4O00268 1085 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 FCHO1O14526 889 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 CTAGE5O15320 804 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SLC16A6O15403 523 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SPINT1O43278 529 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 ANXA2P07355 339 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 SNRPA1P09661 255 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 PLS3P13797 630 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 TBXAS1P24557 533 aaPredicted RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 WASP42768 502 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 MXI1P50539 228 aa7.29□□□□□ -1.24
SMCO1-201ENST00000397537 WDR4P57081 412 aaKnown RBP7.29□□□□□ -1.24
SMCO1-201ENST00000397537 C21orf58P58505 322 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms