RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PDCL3Q9H2J4 239 aa25.08■■□□□ 1.6
TSPAN4-202ENST00000397396 HMGXB4Q9UGU5 601 aa25.08■■□□□ 1.6
TSPAN4-202ENST00000397396 CEP83Q9Y592 693 aa25.08■■□□□ 1.6
TSPAN4-202ENST00000397396 EIF3CLB5ME19 914 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 NT5C1B-RDH14C9J2C7 533 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 H7C4K7 107 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 CAPN15O75808 1086 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 OAZ2O95190 189 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 NDUFA10O95299 355 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 IGFBP6P24592 240 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 KRT83P78385 493 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 KRT17Q04695 432 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 SPA17Q15506 151 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 MAPRE1Q15691 268 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 SLC18A3Q16572 532 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 FAM171A1Q5VUB5 890 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 GPIHBP1Q8IV16 184 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 ZNF830Q96NB3 372 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 TWNKQ96RR1 684 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 EIF3CQ99613 913 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 SYT11Q9BT88 431 aa25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 EPN1Q9Y6I3 576 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-202ENST00000397396 TSC2P49815 1807 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 PLEKP08567 350 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 BMP8BP34820 402 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 PBX3P40426 434 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 TSPY1Q01534 308 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 ASTE1Q2TB18 679 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 USP41Q3LFD5 358 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 C10orf76Q5T2E6 689 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 ZNF280DQ6N043 979 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 ANKS3Q6ZW76 656 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 OSTM1Q86WC4 334 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 B3GALNT2Q8NCR0 500 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 ZNF606Q8WXB4 792 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 SAMD11Q96NU1 681 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 SYT15Q9BQS2 421 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 TTPALQ9BTX7 342 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 SEPT11Q9NVA2 429 aaKnown RBP25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 PCDHGC3Q9UN70 934 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 PCDHA11Q9Y5I1 949 aa25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 TIMM13Q9Y5L4 95 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-202ENST00000397396 H0YGN5 161 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 LSM8O95777 96 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 TKTP29401 623 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 CNGA2Q16280 664 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 ARHGAP17Q68EM7 881 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 RAD9BQ6WBX8 426 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 ACOT1Q86TX2 421 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 SLC20A1Q8WUM9 679 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 DDX1Q92499 740 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 HERC2P3Q9BVR0 1158 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 PLVAPQ9BX97 442 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 GPR62Q9BZJ7 368 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 ADAMTS1Q9UHI8 967 aa25.05■■□□□ 1.6
TSPAN4-202ENST00000397396 OR6C75A6NL08 312 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 LCA5LO95447 670 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 EFEMP2O95967 443 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 SOD2P04179 222 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 PDGFRBP09619 1106 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 BRD2P25440 801 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 FMO1Q01740 532 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 PLCB3Q01970 1234 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 VARS2Q5ST30 1063 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 TAF3Q5VWG9 929 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 DDX53Q86TM3 631 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 TMEM173Q86WV6 379 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 CEP57Q86XR8 500 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 GLYCTKQ8IVS8 523 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 GPR65Q8IYL9 337 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 RNF168Q8IYW5 571 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 ZNF518BQ9C0D4 1074 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 HESX1Q9UBX0 185 aa25.04■■□□□ 1.6
TSPAN4-202ENST00000397396 CCP110O43303 1012 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 ATP8B3O60423 1300 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 MMEP08473 750 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 PTPN1P18031 435 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 LMO2P25791 158 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 INTS6LQ5JSJ4 861 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 KIAA1841Q6NSI8 718 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 DCP1BQ8IZD4 617 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 BCL7CQ8WUZ0 217 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 ACP6Q9NPH0 428 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 SSX2IPQ9Y2D8 614 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 ZKSCAN5Q9Y2L8 839 aa25.03■■□□□ 1.6
TSPAN4-202ENST00000397396 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 O00370 1275 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 CCDC175P0C221 793 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 GZMAP12544 262 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 CREMQ03060 361 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 SMARCB1Q12824 385 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 ORC1Q13415 861 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 MRPL58Q14197 206 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 RAB30Q15771 203 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 ALKBH5Q6P6C2 394 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 LCLAT1Q6UWP7 414 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 SLC30A5Q8TAD4 765 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 PIK3R5Q8WYR1 880 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms