RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 HTR4Q13639 388 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 SUGP1Q8IWZ8 645 aaKnown RBP15.63■□□□□ 0.09
SEC13-208ENST00000397109 NPAS3Q8IXF0 933 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 SLC44A3Q8N4M1 653 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 PARD3BQ8TEW8 1205 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 ACBD6Q9BR61 282 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 GTPBP4Q9BZE4 634 aaKnown RBP15.63■□□□□ 0.09
SEC13-208ENST00000397109 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 ASAH2Q9NR71 780 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 CEP72Q9P209 647 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 FRMD4BQ9Y2L6 1034 aa15.63■□□□□ 0.09
SEC13-208ENST00000397109 ARIH1Q9Y4X5 557 aaPredicted RBP15.63■□□□□ 0.09
SEC13-208ENST00000397109 SMC2O95347 1197 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 PCSK1P29120 753 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 EPHA5P54756 1037 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 TRPC3Q13507 836 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 NFE2Q16621 373 aaPredicted RBP15.62■□□□□ 0.09
SEC13-208ENST00000397109 NFIL3Q16649 462 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 PRSS36Q5K4E3 855 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 ITIH5Q86UX2 942 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 FBXL6Q8N531 539 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 RSAD2Q8WXG1 361 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 GSDMAQ96QA5 445 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 CRISPLD1Q9H336 500 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 DDX43Q9NXZ2 648 aaKnown RBP15.62■□□□□ 0.09
SEC13-208ENST00000397109 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
SEC13-208ENST00000397109 GABRDO14764 452 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 MAPK13O15264 365 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 PHACTR2O75167 634 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 SRFP11831 508 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 RPL13P26373 211 aaKnown RBP15.61■□□□□ 0.09
SEC13-208ENST00000397109 ATICP31939 592 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 CLDN10P78369 228 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 PNOCQ13519 176 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 VEPH1Q14D04 833 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 SLC5A9Q2M3M2 681 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 SOWAHAQ2M3V2 549 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 MGAT5BQ3V5L5 792 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 SCARA3Q6AZY7 606 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 LIMS2Q7Z4I7 341 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 LRRTM3Q86VH5 581 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 TMC2Q8TDI7 906 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 ING5Q8WYH8 240 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 ZNF516Q92618 1163 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 PPP1R9BQ96SB3 815 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 SMOC2Q9H3U7 446 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 FBXL21Q9UKT6 434 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 PCDHB5Q9Y5E4 795 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 NUMBLQ9Y6R0 609 aa15.61■□□□□ 0.09
SEC13-208ENST00000397109 FGF19O95750 216 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 STAU1O95793 577 aaKnown RBP15.6■□□□□ 0.09
SEC13-208ENST00000397109 CST3P01034 146 aaPredicted RBP15.6■□□□□ 0.09
SEC13-208ENST00000397109 MYL4P12829 197 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 CEBPBP17676 345 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 INTS6LQ5JSJ4 861 aaKnown RBP15.6■□□□□ 0.09
SEC13-208ENST00000397109 CEP135Q66GS9 1140 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 PARM1Q6UWI2 310 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 HS6ST3Q8IZP7 471 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 PSMG2Q969U7 264 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 MMS19Q96T76 1030 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 SEPT5Q99719 369 aaPredicted RBP15.6■□□□□ 0.09
SEC13-208ENST00000397109 GPR88Q9GZN0 384 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 DNAJC25Q9H1X3 360 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 ABI2Q9NYB9 513 aaPredicted RBP15.6■□□□□ 0.09
SEC13-208ENST00000397109 WNT16Q9UBV4 365 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 MAPK8IP1Q9UQF2 711 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 ZNF318Q5VUA4 2279 aa15.6■□□□□ 0.09
SEC13-208ENST00000397109 LRRIQ3A6PVS8 624 aaPredicted RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 HAPLN1P10915 354 aaPredicted RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 NR2F2P24468 414 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 CASP4P49662 377 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 ENPEPQ07075 957 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 BIRC3Q13489 604 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 SASS6Q6UVJ0 657 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 DNAJB7Q7Z6W7 309 aaPredicted RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 TTC9BQ8N6N2 239 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 PLEKHO2Q8TD55 490 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 FGF14Q92915 247 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 SMARCE1Q969G3 411 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 TCEAL4Q96EI5 215 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 ABCB6Q9NP58 842 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 KIAA1468Q9P260 1216 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 IKBKBO14920 756 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 NARSO43776 548 aaKnown RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 TACC1O75410 805 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 ECI2O75521 394 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 WARSP23381 471 aaKnown RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 CCR2P41597 374 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 TNNC1P63316 161 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 MAPRE1Q15691 268 aaKnown RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 TAF12Q16514 161 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 CAMK4Q16566 473 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 EDRF1Q3B7T1 1238 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms