RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 RPL13P26373 211 aaKnown RBP14.97□□□□□ -0.01
SEC13-204ENST00000397099 ATICP31939 592 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 WNT7BP56706 349 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 ENPEPQ07075 957 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 DPYDQ12882 1025 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 MAPRE1Q15691 268 aaKnown RBP14.97□□□□□ -0.01
SEC13-204ENST00000397099 NFIL3Q16649 462 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 CWF19L1Q69YN2 538 aaKnown RBP14.97□□□□□ -0.01
SEC13-204ENST00000397099 RDH13Q8NBN7 331 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 KIAA0895Q8NCT3 520 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 OR10T2Q8NGX3 314 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 FGF14Q92915 247 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 ELSPBP1Q96BH3 223 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 FUBP3Q96I24 572 aaKnown RBP eCLIP14.97□□□□□ -0.01
SEC13-204ENST00000397099 CEP295NLQ96MC4 621 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 CEP72Q9P209 647 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 SIX4Q9UIU6 781 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 FRMD4BQ9Y2L6 1034 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 SOBPA7XYQ1 873 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 GABRDO14764 452 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 NPR3P17342 541 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 AOC1P19801 751 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.01
SEC13-204ENST00000397099 CLDN10P78369 228 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 PRKCQQ04759 706 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 TRPC3Q13507 836 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 TAF12Q16514 161 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 SLC5A9Q2M3M2 681 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 MGAT5BQ3V5L5 792 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 PHLDB3Q6NSJ2 640 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 PARM1Q6UWI2 310 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 ADGRF2Q8IZF7 708 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 TMEM130Q8N3G9 435 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 GUF1Q8N442 669 aaKnown RBP14.96□□□□□ -0.01
SEC13-204ENST00000397099 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 OR5B17Q8NGF7 314 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 GPR152Q8TDT2 470 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 ING5Q8WYH8 240 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 SYAP1Q96A49 352 aaPredicted RBP14.96□□□□□ -0.01
SEC13-204ENST00000397099 CCDC127Q96BQ5 260 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 GCNAQ96QF7 691 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 KCTD10Q9H3F6 313 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 TRPV4Q9HBA0 871 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 ZFP14Q9HCL3 533 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 DMAC2Q9NW81 257 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 DDX43Q9NXZ2 648 aaKnown RBP14.96□□□□□ -0.01
SEC13-204ENST00000397099 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
SEC13-204ENST00000397099 L1RE1Q9UN81 338 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 TRAF3IP3Q9Y228 551 aa14.96□□□□□ -0.01
SEC13-204ENST00000397099 PIEZO1Q92508 2521 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 KRBA1A5PL33 1030 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 IKBKBO14920 756 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 PI15O43692 258 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 TACC1O75410 805 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 VNN2O95498 520 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 HAPLN1P10915 354 aaPredicted RBP14.95□□□□□ -0.02
SEC13-204ENST00000397099 MYL4P12829 197 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 CEBPBP17676 345 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 WEE1P30291 646 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 CDC25CP30307 473 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 CFAP221Q4G0U5 840 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 ARHGAP15Q53QZ3 475 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 INTS6LQ5JSJ4 861 aaKnown RBP14.95□□□□□ -0.02
SEC13-204ENST00000397099 C4orf50Q6ZRC1 276 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 LIMS2Q7Z4I7 341 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 DNAJB7Q7Z6W7 309 aaPredicted RBP14.95□□□□□ -0.02
SEC13-204ENST00000397099 ELOA2Q8IYF1 753 aaPredicted RBP14.95□□□□□ -0.02
SEC13-204ENST00000397099 FAM200AQ8TCP9 573 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 DEPDC1BQ8WUY9 529 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 SMARCD2Q92925 531 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 MCRS1Q96EZ8 462 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 TIGD1Q96MW7 591 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 GSDMAQ96QA5 445 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 SEPT5Q99719 369 aaPredicted RBP14.95□□□□□ -0.02
SEC13-204ENST00000397099 VRTNQ9H8Y1 702 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 TBC1D17Q9HA65 648 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 CDH9Q9ULB4 789 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 SLC27A5Q9Y2P5 690 aa14.95□□□□□ -0.02
SEC13-204ENST00000397099 PTPRJQ12913 1337 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 GFRA3O60609 400 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 PHACTR2O75167 634 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 SMC2O95347 1197 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 NR3C1P04150 777 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 P4HA1P13674 534 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 DDX6P26196 483 aaKnown RBP eCLIP14.94□□□□□ -0.02
SEC13-204ENST00000397099 MAGEA11P43364 429 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 TNNC1P63316 161 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 FAM160A1Q05DH4 1040 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 SOWAHAQ2M3V2 549 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 FMR1NBQ8N0W7 255 aaPredicted RBP14.94□□□□□ -0.02
SEC13-204ENST00000397099 DNASE1L2Q92874 299 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 ASB16Q96NS5 453 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 CRISPLD1Q9H336 500 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 GOLPH3LQ9H4A5 285 aa14.94□□□□□ -0.02
SEC13-204ENST00000397099 TRPV5Q9NQA5 729 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms