RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MOSPD3O75425 235 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SOAT2O75908 522 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 ITGB3P05106 788 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 HAPLN1P10915 354 aaPredicted RBP17.62■□□□□ 0.41
DDR1-229ENST00000396342 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
DDR1-229ENST00000396342 LHX1P48742 406 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SLC39A14Q15043 492 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 ITPRIPL2Q3MIP1 535 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 TSSK4Q6SA08 328 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 PRR23BQ6ZRT6 265 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SPATA2LQ8IUW3 424 aaPredicted RBP17.62■□□□□ 0.41
DDR1-229ENST00000396342 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SYNPOQ8N3V7 929 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SUMF1Q8NBK3 374 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 SAAL1Q96ER3 474 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 LPIN3Q9BQK8 851 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 PANK2Q9BZ23 570 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 DNAJC25Q9H1X3 360 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 EPC1Q9H2F5 836 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 CUEDC2Q9H467 287 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 KIF9Q9HAQ2 790 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 KIAA1586Q9HCI6 787 aa17.62■□□□□ 0.41
DDR1-229ENST00000396342 MAGED2Q9UNF1 606 aaPredicted RBP17.62■□□□□ 0.41
DDR1-229ENST00000396342 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 MYMKA6NI61 221 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 SOBPA7XYQ1 873 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 TISP43B9A030 160 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 SPECC1L-ADORA2AF8WAN1 911 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 ATG13O75143 517 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 CLSTN1O94985 981 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 WEE1P30291 646 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 CNR2P34972 360 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 GRSF1Q12849 480 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDR1-229ENST00000396342 GAREM2Q75VX8 874 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 CEP68Q76N32 757 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 PDILTQ8N807 584 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 SPATA18Q8TC71 538 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 CLIC6Q96NY7 704 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 TMEM209Q96SK2 561 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 FIZ1Q96SL8 496 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 ACBD6Q9BR61 282 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 LRRC3Q9BY71 257 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
DDR1-229ENST00000396342 CDV3Q9UKY7 258 aaKnown RBP17.61■□□□□ 0.41
DDR1-229ENST00000396342 ZNF233A6NK53 670 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 STX6O43752 255 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 FOXD2O60548 495 aaPredicted RBP17.6■□□□□ 0.41
DDR1-229ENST00000396342 PDE6CP51160 858 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 CYP4F8P98187 520 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 RESTQ13127 1097 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 MAPRE1Q15691 268 aaKnown RBP17.6■□□□□ 0.41
DDR1-229ENST00000396342 LAIR1Q6GTX8 287 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 GPIHBP1Q8IV16 184 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 CMTM8Q8IZV2 173 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 GPD1LQ8N335 351 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 TTC9BQ8N6N2 239 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 TTC8Q8TAM2 541 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 PI4K2AQ9BTU6 479 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 CRISPLD1Q9H336 500 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 ABCB6Q9NP58 842 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 DDX43Q9NXZ2 648 aaKnown RBP17.6■□□□□ 0.41
DDR1-229ENST00000396342 SNX9Q9Y5X1 595 aa17.6■□□□□ 0.41
DDR1-229ENST00000396342 MYBPHLA2RUH7 354 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 VNN2O95498 520 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 ANXA13P27216 316 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 CTHP32929 405 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 NR1H3Q13133 447 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 SIM2Q14190 667 aaPredicted RBP17.59■□□□□ 0.41
DDR1-229ENST00000396342 DUOXA2Q1HG44 320 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 STXBP5Q5T5C0 1151 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.59■□□□□ 0.41
DDR1-229ENST00000396342 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 ADGRF2Q8IZF7 708 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 TMEM130Q8N3G9 435 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 DCLK2Q8N568 766 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 IQUBQ8NA54 791 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 TTC16Q8NEE8 873 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 CCDC26Q8TAB7 109 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 LRRC15Q8TF66 581 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 FNBP1Q96RU3 617 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 TNMDQ9H2S6 317 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 PCIF1Q9H4Z3 704 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 TDP1Q9NUW8 608 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 CITO14578 2027 aa17.59■□□□□ 0.41
DDR1-229ENST00000396342 GOLGA8IPA6NC78 632 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 GOLGA8JA6NMD2 632 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 K7ELQ4 463 aaPredicted RBP17.58■□□□□ 0.4
DDR1-229ENST00000396342 SPTLC2O15270 562 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 LILRB5O75023 590 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 PRPF6O94906 941 aaKnown RBP17.58■□□□□ 0.4
DDR1-229ENST00000396342 CHRNB1P11230 501 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 ADSSP30520 456 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 ASIC1P78348 528 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 PDGFRLQ15198 375 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
DDR1-229ENST00000396342 DPH6Q7L8W6 267 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 HS2ST1Q7LGA3 356 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 SCN4BQ8IWT1 228 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms