RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SCARA5Q6ZMJ2 495 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 Q6ZVU0 165 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 H2AFVQ71UI9 128 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 TADA2BQ86TJ2 420 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SPATS2Q86XZ4 545 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 TRIM58Q8NG06 486 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ZNF296Q8WUU4 475 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 ANKRD36BP1Q96IX9 119 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ACAP3Q96P50 834 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 APOL6Q9BWW8 343 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SNTG2Q9NY99 539 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 VPS18Q9P253 973 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NENFQ9UMX5 172 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 PIN4Q9Y237 131 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 PCDHB4Q9Y5E5 795 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 GRIN2DO15399 1336 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 MROH7Q68CQ1 1323 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SPINT1O43278 529 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NCK2O43639 380 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 PALMO75781 387 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 MYCP01106 439 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 ITGB3P05106 788 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 WEE2P0C1S8 567 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 CD58P19256 250 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 AKAP5P24588 427 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 PDE6CP51160 858 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 DNA2P51530 1060 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 CRYBB1P53674 252 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 PTPROQ16827 1216 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SGSM1Q2NKQ1 1148 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ZNF394Q53GI3 561 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 CCSAPQ6IQ19 270 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 TAF2Q6P1X5 1199 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NOTUMQ6P988 496 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SLC27A1Q6PCB7 646 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NME8Q8N427 588 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 C1orf127Q8N9H9 656 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 KLHDC9Q8NEP7 349 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NANOS1Q8WY41 292 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 DDX1Q92499 740 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 ALS2CR12Q96Q35 445 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 PSMB7Q99436 277 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 CELF4Q9BZC1 486 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 TRIM6Q9C030 488 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 THAP2Q9H0W7 228 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 XYLT2Q9H1B5 865 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 GOLPH3Q9H4A6 298 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 NXF3Q9H4D5 531 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 CHORDC1Q9UHD1 332 aaPredicted RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 DDX20Q9UHI6 824 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
RTN4-205ENST00000394609 FKBPLQ9UIM3 349 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 SIX4Q9UIU6 781 aa7.41□□□□□ -1.22
RTN4-205ENST00000394609 ZNF185O15231 689 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 FTCDO95954 541 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 INHAP05111 366 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 TBXAS1P24557 533 aaPredicted RBP7.4□□□□□ -1.23
RTN4-205ENST00000394609 CXCR5P32302 372 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 FMO1Q01740 532 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 CDR2Q01850 454 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 PTSQ03393 145 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 CASP8Q14790 479 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 TMEM132DQ14C87 1099 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 ZNF699Q32M78 642 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 WDR72Q3MJ13 1102 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 DCAF4L1Q3SXM0 396 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 GLRA4Q5JXX5 417 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 MAP3K21Q5TCX8 1036 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 LRRC31Q6UY01 552 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 RNF10Q8N5U6 811 aaKnown RBP7.4□□□□□ -1.23
RTN4-205ENST00000394609 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 ZMAT2Q96NC0 199 aaKnown RBP7.4□□□□□ -1.23
RTN4-205ENST00000394609 ASB7Q9H672 318 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 KLK14Q9P0G3 267 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 POLIQ9UNA4 740 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.23
RTN4-205ENST00000394609 SAR1BQ9Y6B6 198 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 CDY2AQ9Y6F7 541 aa7.4□□□□□ -1.23
RTN4-205ENST00000394609 SIP14410 1827 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CTAGE15A4D2H0 777 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 GRID2IPA4D2P6 1211 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 FKTNO75072 461 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CHRNA1P02708 482 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CTAGE8P0CG41 777 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 POLR2BP30876 1174 aaKnown RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 THPOP40225 353 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 ACLYP53396 1101 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CDH8P55286 799 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 NKX3-2P78367 333 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 MRPS6P82932 125 aaKnown RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 AMPD2Q01433 879 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 PTGISQ16647 500 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 KYAT1Q16773 422 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms