RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SLC7A5Q01650 507 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 PTPN20Q4JDL3 420 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CCNI2Q6ZMN8 369 aaPredicted RBP15.87■□□□□ 0.13
CCT4-201ENST00000394440 AP1M1Q9BXS5 423 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 CHST12Q9NRB3 414 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 RNF19AQ9NV58 838 aa15.87■□□□□ 0.13
CCT4-201ENST00000394440 KRIT1O00522 736 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 XPOTO43592 962 aaKnown RBP15.86■□□□□ 0.13
CCT4-201ENST00000394440 CLUL1Q15846 466 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 CNGA2Q16280 664 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 PTGISQ16647 500 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 AADACL2Q6P093 401 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 FEZF2Q8TBJ5 459 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 NR2E1Q9Y466 385 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 NME7Q9Y5B8 376 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 SNX9Q9Y5X1 595 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 TMEM191CA6NGB0 347 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 BHMG1C9JSJ3 638 aaPredicted RBP15.86■□□□□ 0.13
CCT4-201ENST00000394440 PTGESO14684 152 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 RAD51CO43502 376 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 CABYRO75952 493 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 MAN1A1P33908 653 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 RNF180Q86T96 592 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 ERICH1Q86X53 443 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 C3orf20Q8ND61 904 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 RAET1EQ8TD07 263 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 NAP1L3Q99457 506 aaPredicted RBP15.86■□□□□ 0.13
CCT4-201ENST00000394440 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
CCT4-201ENST00000394440 NT5C1AQ9BXI3 368 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 OSBPL7Q9BZF2 842 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
CCT4-201ENST00000394440 FAM105AQ9NUU6 356 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 KIAA1257Q9ULG3 409 aa15.86■□□□□ 0.13
CCT4-201ENST00000394440 MAP2K7O14733 419 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 MICAL2O94851 1124 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 GJB6O95452 261 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 GLI1P08151 1106 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 PYGMP11217 842 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 RWDD2BP57060 319 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 RPL7AP62424 266 aaKnown RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 FBXO47Q5MNV8 452 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 LIMS2Q7Z4I7 341 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 KLHL7Q8IXQ5 586 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 ERVK-5Q9HDB9 667 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 GDF3Q9NR23 364 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 STRIP2Q9ULQ0 834 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 SART1O43290 800 aaKnown RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 ATF7P17544 494 aaPredicted RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 LRPAP1P30533 357 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 GPD2P43304 727 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 ACLYP53396 1101 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 ZNF252P-AS1Q0IIN9 211 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 PTK7Q13308 1070 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 SGO2Q562F6 1265 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 ZNF560Q96MR9 790 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 PPP1R10Q96QC0 940 aaKnown RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 DDX47Q9H0S4 455 aaKnown RBP15.85■□□□□ 0.13
CCT4-201ENST00000394440 SLITRK6Q9H5Y7 841 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 GDAP2Q9NXN4 497 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
CCT4-201ENST00000394440 SPTLC1O15269 473 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 HEXIM1O94992 359 aaKnown RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 PNPLA4P41247 253 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 SOWAHAQ2M3V2 549 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 SEL1L2Q5TEA6 688 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 DNAJC24Q6P3W2 148 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 LCLAT1Q6UWP7 414 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 GSTCDQ8NEC7 633 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 DDX27Q96GQ7 796 aaKnown RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 CPXM1Q96SM3 734 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 GOLGA2P5Q9HBQ8 144 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 MEIS3P2A8K0S8 358 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 GPR182O15218 404 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 THPOP40225 353 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 GABRB2P47870 512 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 TAP1Q03518 808 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 FAM26DQ5JW98 314 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 LHX8Q68G74 356 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 UNC93AQ86WB7 457 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 ZDHHC14Q8IZN3 488 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 AENQ8WTP8 325 aaKnown RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 HEXIM2Q96MH2 286 aaKnown RBP15.84■□□□□ 0.13
CCT4-201ENST00000394440 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 IP6K2Q9UHH9 426 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 LCMT1Q9UIC8 334 aa15.84■□□□□ 0.13
CCT4-201ENST00000394440 TDRD15B5MCY1 1934 aaKnown RBP15.83■□□□□ 0.13
CCT4-201ENST00000394440 ZSCAN5CA6NGD5 496 aaPredicted RBP15.83■□□□□ 0.12
CCT4-201ENST00000394440 MOXD2PA6NHM9 499 aa15.83■□□□□ 0.12
CCT4-201ENST00000394440 M0QYV0 167 aa15.83■□□□□ 0.12
CCT4-201ENST00000394440 INHAP05111 366 aa15.83■□□□□ 0.12
CCT4-201ENST00000394440 STILQ15468 1287 aa15.83■□□□□ 0.12
CCT4-201ENST00000394440 CYP4A22Q5TCH4 519 aa15.83■□□□□ 0.12
CCT4-201ENST00000394440 GSPT2Q8IYD1 628 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms