RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MICAL1Q8TDZ2 1067 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CFAP36Q96G28 342 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 HEXIM2Q96MH2 286 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 GMLQ99445 158 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 PHTF1Q9UMS5 762 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 SLX4Q8IY92 1834 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 A0A1W2PPM1 405 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 VNN1O95497 513 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 C4BPAP04003 597 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FDX1P10109 184 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CTCFP49711 727 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 PSEN1P49768 467 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 OTUD4Q01804 1114 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 SP2Q02086 613 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 TFDP1Q14186 410 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 ACCSLQ4AC99 568 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 LVRNQ6Q4G3 990 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 SPOCD1Q6ZMY3 1216 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 TAS1R3Q7RTX0 852 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 PIGWQ7Z7B1 504 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FITM2Q8N6M3 262 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FAM167BQ9BTA0 163 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 MAD1L1Q9Y6D9 718 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 RPA3P35244 121 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 OR6B2Q6IFH4 312 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 MON1BQ7L1V2 547 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PDIK1LQ8N165 341 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 NSMCE1Q8WV22 266 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ANKRD36BP1Q96IX9 119 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ATXN2Q99700 1313 aaKnown RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 MAFGO15525 162 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ANP32DO95626 131 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 MT-ND3P03897 115 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PRKCBP05771 671 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 KRT16P08779 473 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PHBP35232 272 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 RFC1P35251 1148 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 TCF7P36402 384 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 KRT81Q14533 505 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 GBP7Q8N8V2 638 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 MRPL4Q9BYD3 311 aaKnown RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 UBN1Q9NPG3 1134 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 TJP2Q9UDY2 1190 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PGK2P07205 417 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 INHBAP08476 426 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 GHRP10912 638 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 RGS7P49802 495 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ARL4CP56559 192 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 GAD2Q05329 585 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 XRCC4Q13426 336 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 20.8
ACTN1-203ENST00000394419 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 FAM102AQ5T9C2 384 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 PPP1R14CQ8TAE6 165 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 AGAP11Q8TF27 550 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
ACTN1-203ENST00000394419 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
ACTN1-203ENST00000394419 CFAP73A6NFT4 308 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 M0QYV0 167 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 DNALI1O14645 258 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 MCF2LO15068 1137 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 LIASO43766 372 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 DNAJC8O75937 253 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 RGS20O76081 388 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 ELF1P32519 619 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 PCK1P35558 622 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 NAMPTP43490 491 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 EIF3EP60228 445 aaKnown RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 RNASELQ05823 741 aaKnown RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 FKBP1CQ5VVH2 108 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 MFSD5Q6N075 450 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 C7orf31Q8N865 590 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 RDM1Q8NG50 284 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms