RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 PMLP29590 882 aa17.96■□□□□ 0.47
PTPA-207ENST00000393370 HALP42357 657 aa17.96■□□□□ 0.47
PTPA-207ENST00000393370 KYAT3Q6YP21 454 aaKnown RBP17.96■□□□□ 0.47
PTPA-207ENST00000393370 PATL1Q86TB9 770 aaKnown RBP17.96■□□□□ 0.47
PTPA-207ENST00000393370 MRPL1Q9BYD6 325 aaKnown RBP17.96■□□□□ 0.47
PTPA-207ENST00000393370 SSU72Q9NP77 194 aaKnown RBP17.96■□□□□ 0.47
PTPA-207ENST00000393370 TAGLN3Q9UI15 199 aa17.96■□□□□ 0.47
PTPA-207ENST00000393370 LAMB1P07942 1786 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 SERPINB7O75635 380 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ADSSP30520 456 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 XIAPP98170 497 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 PLCB3Q01970 1234 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 C12orf60Q5U649 245 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 GLIS1Q8NBF1 620 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ICA1LQ8NDH6 482 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 UBE2TQ9NPD8 197 aaPredicted RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 FAF1Q9UNN5 650 aaPredicted RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 ARHGAP10A1A4S6 786 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 CAPN8A6NHC0 703 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ARHGAP42A6NI28 874 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 BIRC5O15392 142 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ALDH2P05091 517 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 NCKAP1LP55160 1127 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 NAA20P61599 178 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 NOP14P78316 857 aaKnown RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 COG2Q14746 738 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ACAP1Q15027 740 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 GRAMD1BQ3KR37 738 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 EFHC1Q5JVL4 640 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 ZNF362Q5T0B9 420 aaPredicted RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 PRPF39Q86UA1 669 aaKnown RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 DQX1Q8TE96 717 aaKnown RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 GFM2Q969S9 779 aaKnown RBP17.95■□□□□ 0.46
PTPA-207ENST00000393370 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
PTPA-207ENST00000393370 F5H6K3 240 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 TM9SF1O15321 606 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 BANF1O75531 89 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 KLRC2P26717 231 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 BMT2Q1RMZ1 405 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 ZNF410Q86VK4 478 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 ALDH16A1Q8IZ83 802 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 BANPQ8N9N5 519 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 USP6NLQ92738 828 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 SLC24A2Q9UI40 661 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 SFI1A8K8P3 1242 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 EML1O00423 815 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 SGPL1O95470 568 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 STIP1P31948 543 aaKnown RBP17.94■□□□□ 0.46
PTPA-207ENST00000393370 FDFT1P37268 417 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 VCPP55072 806 aaKnown RBP17.94■□□□□ 0.46
PTPA-207ENST00000393370 MYL7Q01449 175 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 SNAPC2Q13487 334 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 CCNIQ14094 377 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 GK3PQ14409 553 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 ZYXQ15942 572 aaKnown RBP17.94■□□□□ 0.46
PTPA-207ENST00000393370 GSTA5Q7RTV2 222 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 ZNF444Q8N0Y2 327 aaPredicted RBP17.94■□□□□ 0.46
PTPA-207ENST00000393370 PPM1KQ8N3J5 372 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 MARVELD2Q8N4S9 558 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 HIPK4Q8NE63 616 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 TTC17Q96AE7 1141 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 APPL1Q9UKG1 709 aa17.94■□□□□ 0.46
PTPA-207ENST00000393370 SH3PXD2BA1X283 911 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 CYP1A2P05177 515 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 PAX3P23760 479 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 PRDX5P30044 214 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 STT3AP46977 705 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 ZNF200P98182 395 aaPredicted RBP17.93■□□□□ 0.46
PTPA-207ENST00000393370 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 CABLES1Q8TDN4 633 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
PTPA-207ENST00000393370 FAM81BQ96LP2 452 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 BTBD9Q96Q07 612 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 MRPS26Q9BYN8 205 aaKnown RBP17.93■□□□□ 0.46
PTPA-207ENST00000393370 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
PTPA-207ENST00000393370 ZNF148Q9UQR1 794 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 ZSCAN5DPP0CG00 497 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 RALAP11233 206 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 CDH2P19022 906 aaPredicted RBP17.93■□□□□ 0.46
PTPA-207ENST00000393370 SLC25A3Q00325 362 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 RELAQ04206 551 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 HIC1Q14526 733 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 LMO3Q8TAP4 145 aa17.93■□□□□ 0.46
PTPA-207ENST00000393370 PRR5-ARHGAP8B1AHC4 643 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 PDGFRBP09619 1106 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 POLD1P28340 1107 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 CPOXP36551 454 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 PSMD7P51665 324 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 ARHGAP8P85298 464 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 ARHGAP4P98171 946 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 IYDQ6PHW0 289 aa17.92■□□□□ 0.46
PTPA-207ENST00000393370 CATSPER3Q86XQ3 398 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms