RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NRCAMQ92823 1304 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CEP104O60308 925 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 TMCC1O94876 653 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 ATP1A1P05023 1023 aaKnown RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PHEXP78562 749 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 GKAP1Q5VSY0 366 aaPredicted RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 SESTD1Q86VW0 696 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 NFKBIZQ9BYH8 718 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 CNTNAP2Q9UHC6 1331 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 MBLAC1A4D2B0 266 aaPredicted RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 CCDC166P0CW27 439 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PHKA2P46019 1235 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 MCL1Q07820 350 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PSMD6Q15008 389 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 ARHGAP44Q17R89 818 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 TDRD12Q587J7 1177 aaKnown RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 KRT39Q6A163 491 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 OR52E8Q6IFG1 317 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 THNSL1Q8IYQ7 743 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 ARFGAP2Q8N6H7 521 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 HINFPQ9BQA5 517 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PI4K2AQ9BTU6 479 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 PCDH18Q9HCL0 1135 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 TMEM8AQ9HCN3 771 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 SRRDQ9UH36 339 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 FBXL5Q9UKA1 691 aa20.1■□□□□ 0.81
CCDC50-202ENST00000392456 BARX2Q9UMQ3 279 aaPredicted RBP20.1■□□□□ 0.81
CCDC50-202ENST00000392456 RRN3P2A6NIE6 340 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 PDE2AO00408 941 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 SEPT4O43236 478 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 KIF11P52732 1056 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 GJA9P57773 515 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 GFPT1Q06210 699 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 ADCY1Q08828 1119 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 KIF22Q14807 665 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 DRAP1Q14919 205 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 TMEM154Q6P9G4 183 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 MMGT1Q8N4V1 131 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 OR5B17Q8NGF7 314 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 DYDC1Q8WWB3 177 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 DNAJB3Q8WWF6 145 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 SYN2Q92777 582 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 RPS6KC1Q96S38 1066 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 LACRTQ9GZZ8 138 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 HAUS4Q9H6D7 363 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 KIAA1586Q9HCI6 787 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 UBE2TQ9NPD8 197 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 DMGDHQ9UI17 866 aaKnown RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 GPR25O00155 361 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 CYP2C9P11712 490 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 TNNI1P19237 187 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 CLDN10P78369 228 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 C2orf54Q08AI8 447 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 FOXB2Q5VYV0 432 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 REM2Q8IYK8 340 aaPredicted RBP20.09■□□□□ 0.81
CCDC50-202ENST00000392456 ATP11CQ8NB49 1132 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 CFHR5Q9BXR6 569 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 ADAMTS10Q9H324 1103 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 DUSP10Q9Y6W6 482 aa20.09■□□□□ 0.81
CCDC50-202ENST00000392456 P4HA2O15460 535 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 GPR32O75388 356 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 NQO1P15559 274 aaKnown RBP20.08■□□□□ 0.81
CCDC50-202ENST00000392456 ALOX15P16050 662 aaPredicted RBP20.08■□□□□ 0.81
CCDC50-202ENST00000392456 ARF4P18085 180 aaPredicted RBP20.08■□□□□ 0.81
CCDC50-202ENST00000392456 FUT4P22083 530 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 SESN3P58005 492 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 PTK2Q05397 1052 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 POU5F1BQ06416 359 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 CFAP58Q5T655 872 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 C15orf39Q6ZRI6 1047 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 DNAAF5Q86Y56 855 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 IFNLR1Q8IU57 520 aaPredicted RBP20.08■□□□□ 0.81
CCDC50-202ENST00000392456 TMEM130Q8N3G9 435 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.812e-7■□□□□ 10.6
CCDC50-202ENST00000392456 RHBDL2Q9NX52 303 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 SLC12A6Q9UHW9 1150 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 PAIP2BQ9ULR5 123 aaKnown RBP20.08■□□□□ 0.81
CCDC50-202ENST00000392456 ATP8A1Q9Y2Q0 1164 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 COQ4Q9Y3A0 265 aa20.08■□□□□ 0.81
CCDC50-202ENST00000392456 FOXN3O00409 490 aaPredicted RBP20.08■□□□□ 0.8
CCDC50-202ENST00000392456 SERPING1P05155 500 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 KLHL30Q0D2K2 578 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 ASIC2Q16515 512 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 TDRD10Q5VZ19 366 aaKnown RBP20.08■□□□□ 0.8
CCDC50-202ENST00000392456 MPZL3Q6UWV2 235 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF571Q7Z3V5 609 aaPredicted RBP20.08■□□□□ 0.8
CCDC50-202ENST00000392456 PRCCQ92733 491 aaPredicted RBP20.08■□□□□ 0.8
CCDC50-202ENST00000392456 FNBP1Q96RU3 617 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 OXCT2Q9BYC2 517 aaPredicted RBP20.08■□□□□ 0.8
CCDC50-202ENST00000392456 STK33Q9BYT3 514 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 CDT1Q9H211 546 aa20.08■□□□□ 0.8
CCDC50-202ENST00000392456 PMM2O15305 246 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 LDHAP00338 332 aaKnown RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 C4BPAP04003 597 aaKnown RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 CYLC1P35663 651 aaPredicted RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 KIF5AQ12840 1032 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 EXOC3L1Q86VI1 746 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms