RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 PPP1R15BQ5SWA1 713 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 UBXN11Q5T124 520 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 RSPH3Q86UC2 560 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 HEXIM2Q96MH2 286 aaKnown RBP26.69■■□□□ 1.86
SHOX2-201ENST00000389589 NT5C1AQ9BXI3 368 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 PCYOX1Q9UHG3 505 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 RASAL2Q9UJF2 1139 aa26.69■■□□□ 1.86
SHOX2-201ENST00000389589 CD4P01730 458 aa26.68■■□□□ 1.86
SHOX2-201ENST00000389589 NDST1P52848 882 aa26.68■■□□□ 1.86
SHOX2-201ENST00000389589 GSCP56915 257 aaPredicted RBP26.68■■□□□ 1.86
SHOX2-201ENST00000389589 MRPS6P82932 125 aaKnown RBP26.68■■□□□ 1.86
SHOX2-201ENST00000389589 GABPB1Q06547 395 aaPredicted RBP26.68■■□□□ 1.86
SHOX2-201ENST00000389589 NBPF20Q3BBV1 942 aa26.68■■□□□ 1.86
SHOX2-201ENST00000389589 KATNAL2Q8IYT4 538 aa26.68■■□□□ 1.86
SHOX2-201ENST00000389589 MAGOHBQ96A72 148 aaKnown RBP26.68■■□□□ 1.86
SHOX2-201ENST00000389589 CXCL16Q9H2A7 254 aa26.68■■□□□ 1.86
SHOX2-201ENST00000389589 RPLP2P05387 115 aaKnown RBP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 RPL7AP62424 266 aaKnown RBP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 PRKCZQ05513 592 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 STILQ15468 1287 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 PTPN20Q4JDL3 420 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 XKR4Q5GH76 650 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 CXCL17Q6UXB2 119 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 MREGQ8N565 214 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 C12orf50Q8NA57 414 aaPredicted RBP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 MCEEQ96PE7 176 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 APOL6Q9BWW8 343 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 TUBGCP4Q9UGJ1 667 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 MICAL2O94851 1124 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 PGK1P00558 417 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 KCNE1P15382 129 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 ORC1Q13415 861 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 PIGHQ14442 188 aaPredicted RBP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 HLTFQ14527 1009 aaKnown RBP eCLIP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 REM2Q8IYK8 340 aaPredicted RBP26.67■■□□□ 1.86
SHOX2-201ENST00000389589 C18orf8Q96DM3 657 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 ST7Q9NRC1 585 aa26.67■■□□□ 1.86
SHOX2-201ENST00000389589 H3BQF6 201 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 O00370 1275 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 AKAP5P24588 427 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 TRADDQ15628 312 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 C9orf57Q5W0N0 161 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 TRPV2Q9Y5S1 764 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 KIF3CO14782 793 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 GJB6O95452 261 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 FNTAP49354 379 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 CACNB2Q08289 660 aaPredicted RBP26.66■■□□□ 1.86
SHOX2-201ENST00000389589 SIX1Q15475 284 aaPredicted RBP26.66■■□□□ 1.86
SHOX2-201ENST00000389589 CYP4A22Q5TCH4 519 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 ALS2CLQ60I27 953 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 ZDHHC14Q8IZN3 488 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 NIPA2Q8N8Q9 360 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 FAM71BQ8TC56 605 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 C18orf25Q96B23 403 aaPredicted RBP26.66■■□□□ 1.86
SHOX2-201ENST00000389589 PARP2Q9UGN5 583 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 CYTH4Q9UIA0 394 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 USTQ9Y2C2 406 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 SNX9Q9Y5X1 595 aa26.66■■□□□ 1.86
SHOX2-201ENST00000389589 SMIM28A0A1B0GU29 152 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 SIGLEC16A6NMB1 481 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 M0QYV0 167 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 RARAP10276 462 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 TAS2R40P59535 323 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 ZNF268Q14587 947 aaPredicted RBP26.65■■□□□ 1.86
SHOX2-201ENST00000389589 GLRA4Q5JXX5 417 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 LRRC38Q5VT99 294 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 FAM228AQ86W67 206 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 EXD1Q8NHP7 514 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 ERP44Q9BS26 406 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 SYNCQ9H7C4 482 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 IPPQ9Y573 584 aa26.65■■□□□ 1.86
SHOX2-201ENST00000389589 GOLGA6BA6NDN3 693 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 PODXLO00592 558 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 FAM153BP0C7A2 387 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 GABRB2P47870 512 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 FAM153CQ494X1 144 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 CCDC137Q6PK04 289 aaKnown RBP26.64■■□□□ 1.86
SHOX2-201ENST00000389589 LCLAT1Q6UWP7 414 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 JAMLQ86YT9 394 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 ZNF560Q96MR9 790 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 LRRC19Q9H756 370 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 FAM153AQ9UHL3 310 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 CDY2AQ9Y6F7 541 aa26.64■■□□□ 1.86
SHOX2-201ENST00000389589 TCRBV7S2A1N4TA0A589 114 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 DAPK3O43293 454 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 ADAMTS4O75173 837 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 CYP3A5P20815 502 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 ECHS1P30084 290 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 COILP38432 576 aaPredicted RBP26.64■■□□□ 1.85
SHOX2-201ENST00000389589 CETN2P41208 172 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 PNPLA4P41247 253 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 PTGIRP43119 386 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 GPD2P43304 727 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 SSR1P43307 286 aaKnown RBP26.64■■□□□ 1.85
SHOX2-201ENST00000389589 PSMC1P62191 440 aaKnown RBP26.64■■□□□ 1.85
SHOX2-201ENST00000389589 GDF6Q6KF10 455 aaPredicted RBP26.64■■□□□ 1.85
SHOX2-201ENST00000389589 MIS12Q9H081 205 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 XPNPEP3Q9NQH7 507 aa26.64■■□□□ 1.85
SHOX2-201ENST00000389589 PIRO00625 290 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 PPEF2O14830 753 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms