RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 IER2Q9BTL4 223 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 FAM126AQ9BYI3 521 aaPredicted RBP18.19■□□□□ 0.5
SMN2-201ENST00000380741 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 EPC1Q9H2F5 836 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 IL21Q9HBE4 155 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 SMG5Q9UPR3 1016 aaKnown RBP18.19■□□□□ 0.5
SMN2-201ENST00000380741 A0A087X0B3 334 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 FRMD3A2A2Y4 597 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 DPYSL4O14531 572 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 IDEP14735 1019 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 POLR2BP30876 1174 aaKnown RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 STAT6P42226 847 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 KPNA1P52294 538 aaPredicted RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 TFAMQ00059 246 aaKnown RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 BRSK2Q8IWQ3 736 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 SPPL2BQ8TCT7 592 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 TASP1Q9H6P5 420 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 OBP2AQ9NY56 170 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 ABI2Q9NYB9 513 aaPredicted RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
SMN2-201ENST00000380741 ZNF638Q14966 1978 aaKnown RBP18.18■□□□□ 0.5
SMN2-201ENST00000380741 SPECC1L-ADORA2AF8WAN1 911 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 ITGB3P05106 788 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
SMN2-201ENST00000380741 CDC25CP30307 473 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 PNPLA4P41247 253 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 CCR3P51677 355 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 SMARCB1Q12824 385 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 GAS6Q14393 721 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 TAF12Q16514 161 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 ARHGAP29Q52LW3 1261 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 WDR44Q5JSH3 913 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 C1orf228Q6PIY5 440 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 TXNDC11Q6PKC3 985 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 DCP1BQ8IZD4 617 aaKnown RBP18.17■□□□□ 0.5
SMN2-201ENST00000380741 C1orf127Q8N9H9 656 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 TTC8Q8TAM2 541 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
SMN2-201ENST00000380741 TMLHEQ9NVH6 421 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 RBAKQ9NYW8 714 aaPredicted RBP18.17■□□□□ 0.5
SMN2-201ENST00000380741 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
SMN2-201ENST00000380741 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
SMN2-201ENST00000380741 MYBPHLA2RUH7 354 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 GOLGA8IPA6NC78 632 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 GOLGA8JA6NMD2 632 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 GARTP22102 1010 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 WEE1P30291 646 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 CTHP32929 405 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SATB1Q01826 763 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 LRRC32Q14392 662 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 PPP2R5DQ14738 602 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SLC39A14Q15043 492 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SCARA3Q6AZY7 606 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SYCP3Q8IZU3 236 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 PDCL2Q8N4E4 241 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 BPIFB1Q8TDL5 484 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 INTS4Q96HW7 963 aaKnown RBP18.16■□□□□ 0.5
SMN2-201ENST00000380741 CBWD1Q9BRT8 395 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 SMG9Q9H0W8 520 aaKnown RBP18.16■□□□□ 0.5
SMN2-201ENST00000380741 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
SMN2-201ENST00000380741 L1RE1Q9UN81 338 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 AGAP1Q9UPQ3 857 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 PCDHB5Q9Y5E4 795 aa18.16■□□□□ 0.5
SMN2-201ENST00000380741 LDHAP00338 332 aaKnown RBP18.15■□□□□ 0.5
SMN2-201ENST00000380741 NRLP54845 237 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 TSPY1Q01534 308 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 TNK2Q07912 1038 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 ALCAMQ13740 583 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 RALGPS2Q86X27 583 aaPredicted RBP18.15■□□□□ 0.5
SMN2-201ENST00000380741 PDILTQ8N807 584 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 NOC3LQ8WTT2 800 aaKnown RBP18.15■□□□□ 0.5
SMN2-201ENST00000380741 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 PANK4Q9NVE7 773 aa18.15■□□□□ 0.5
SMN2-201ENST00000380741 EXTL3O43909 919 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 PRPF6O94906 941 aaKnown RBP18.14■□□□□ 0.49
SMN2-201ENST00000380741 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
SMN2-201ENST00000380741 CXCL12P48061 93 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 GPR15P49685 360 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 PUM1Q14671 1186 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMN2-201ENST00000380741 NFE2Q16621 373 aaPredicted RBP18.14■□□□□ 0.49
SMN2-201ENST00000380741 Q6ZS52 159 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 DGLUCYQ7Z3D6 616 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 CMTM8Q8IZV2 173 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 SPEM1Q8N4L4 309 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 LRRC52Q8N7C0 313 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 STKLD1Q8NE28 680 aa18.14■□□□□ 0.49
SMN2-201ENST00000380741 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms