RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
UBL3-201ENST00000380680 CES2O00748 559 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 IRF6O14896 467 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 KITP10721 976 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 NCF2P19878 526 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 GNL1P36915 607 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 SULT1E1P49888 294 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 DCAF6Q58WW2 860 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 MFSD14CQ5VZR4 134 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 PORCNQ9H237 461 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 ETNK1Q9HBU6 452 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 PHLPP1O60346 1717 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 ZNF142P52746 1687 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 SPATA21Q7Z572 469 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 CDC42EP4Q9H3Q1 356 aaKnown RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 CCDC195A0A1B0GUA6 201 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 GJB6O95452 261 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 PPM1FP49593 454 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 CDH8P55286 799 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 PTPN11Q06124 597 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 PPATQ06203 517 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 TFDP3Q5H9I0 405 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 ASAP3Q8TDY4 903 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 NUDCD1Q96RS6 583 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 FGFR1OP2Q9NVK5 253 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 CELF2O95319 508 aaKnown RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 KCTD19Q17RG1 926 aaPredicted RBP18.65■□□□□ 0.58
UBL3-201ENST00000380680 BRSK2Q8IWQ3 736 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 EXD1Q8NHP7 514 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 ZNF518BQ9C0D4 1074 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 PFDN4Q9NQP4 134 aa18.65■□□□□ 0.58
UBL3-201ENST00000380680 GLRA2P23416 452 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 BOLA3Q53S33 107 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 NUDCD3Q8IVD9 361 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 REPS2Q8NFH8 660 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 PCDHA3Q9Y5H8 950 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
UBL3-201ENST00000380680 TMEM121Q9BTD3 319 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 PSMC3IPQ9P2W1 217 aaPredicted RBP18.64■□□□□ 0.57
UBL3-201ENST00000380680 SPDYE16A6NNV3 312 aaPredicted RBP18.64■□□□□ 0.57
UBL3-201ENST00000380680 RPS6KA5O75582 802 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 CCNE2O96020 404 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 CYP2C8P10632 490 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 VDRP11473 427 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 TRPM4Q8TD43 1214 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 SHC3Q92529 594 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 PGBD4Q96DM1 585 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 ZFP69BQ9UJL9 534 aa18.64■□□□□ 0.57
UBL3-201ENST00000380680 ATP9BO43861 1147 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 FAXCQ5TGI0 409 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 C4orf50Q6ZRC1 276 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 FAM71AQ8IYT1 594 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 MYCBPAPQ8TBZ2 947 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 GDF3Q9NR23 364 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 SMG5Q9UPR3 1016 aaKnown RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 LRP6O75581 1613 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 ACKR2O00590 384 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 TYK2P29597 1187 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 SERPINB6P35237 376 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 ARFIP2P53365 341 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 OTUD4Q01804 1114 aaKnown RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 HDAC11Q96DB2 347 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 ATXN7L3BQ96GX2 97 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 TUBB6Q9BUF5 446 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 FSD1LQ9BXM9 530 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 DUOX1Q9NRD9 1551 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 RPL21P46778 160 aaKnown RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 TPI1P60174 286 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 CCNG2Q16589 344 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 MMEL1Q495T6 779 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 ACTL9Q8TC94 416 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 SGSM3Q96HU1 749 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 ZFATQ9P243 1243 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 PAK5Q9P286 719 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 SALL4Q9UJQ4 1053 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 MAP1SQ66K74 1059 aaPredicted RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 TMC3Q7Z5M5 1100 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 KATNAL1Q9BW62 490 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 WHRNQ9P202 907 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 BCAP29Q9UHQ4 241 aa18.63■□□□□ 0.57
UBL3-201ENST00000380680 UBQLN1Q9UMX0 589 aaKnown RBP18.63■□□□□ 0.57
UBL3-201ENST00000380680 PPP1R12AO14974 1030 aaPredicted RBP18.62■□□□□ 0.57
UBL3-201ENST00000380680 PFDN6O15212 129 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 CSPG5O95196 566 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 GTF2A2P52657 109 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 RYBPQ8N488 228 aaPredicted RBP18.62■□□□□ 0.57
UBL3-201ENST00000380680 COPS5Q92905 334 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 SERPINB12Q96P63 405 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 ARL2BPQ9Y2Y0 163 aa18.62■□□□□ 0.57
UBL3-201ENST00000380680 USP15Q9Y4E8 981 aaPredicted RBP18.62■□□□□ 0.57
UBL3-201ENST00000380680 CFAP69A5D8W1 941 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms