RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CSF1RP07333 972 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TFPTP0C1Z6 253 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 GLULP15104 373 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 HMOX2P30519 316 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CHRNDQ07001 517 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 PTGDRQ13258 359 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 MED21Q13503 144 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ITPK1Q13572 414 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TLR1Q15399 786 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CYP2U1Q7Z449 544 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 SGMS1Q86VZ5 419 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ANGPTL6Q8NI99 470 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 NOC4LQ9BVI4 516 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TOGARAM1Q9Y4F4 1720 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF701M0R085 212 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ENPP3O14638 875 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 FKBP9O95302 570 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 C8BP07358 591 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 CETPP11597 493 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 CDH3P22223 829 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 CALML3P27482 149 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 MCAMP43121 646 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SCNN1DP51172 638 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 POLR2FP61218 127 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 WASHC5Q12768 1159 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 THOC5Q13769 683 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 RAPGEF1Q13905 1077 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 IL17AQ16552 155 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DCAF17Q5H9S7 520 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 KRT79Q5XKE5 535 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF449Q6P9G9 518 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DHDDSQ86SQ9 333 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 TICAM1Q8IUC6 712 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 MMAAQ8IVH4 418 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ARHGEF2Q92974 986 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ART4Q93070 314 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 OTUD5Q96G74 571 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 FAM117AQ9C073 453 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 TMEM60Q9H2L4 133 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 EHD1Q9H4M9 534 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ARMC7Q9H6L4 198 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 C6orf50Q9HD87 102 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ERVK-5Q9HDB9 667 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 TRNAU1APQ9NX07 287 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 NEU2Q9Y3R4 380 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 TLDC2A0PJX2 215 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ARHGAP10A1A4S6 786 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 CLOCKO15516 846 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PRPF4O43172 522 aaKnown RBP eCLIP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SCO2O43819 266 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ONECUT3O60422 494 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 CLPTM1O96005 669 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PCCAP05165 728 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PRDX6P30041 224 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 RPS8P62241 208 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ARHGAP4P98171 946 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 GALNT2Q10471 571 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DLGAP5Q15398 846 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 GRIK5Q16478 980 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PDK4Q16654 411 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF829Q3KNS6 432 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 OGFRL1Q5TC84 451 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DPY19L2P1Q6NXN4 242 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SLC51BQ86UW2 128 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DDHD1Q8NEL9 900 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 EXD1Q8NHP7 514 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 MRRFQ96E11 262 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 DOK1Q99704 481 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PACSIN1Q9BY11 444 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PITPNM3Q9BZ71 974 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 BCS1LQ9Y276 419 aa6.9□□□□□ -1.3
RIPK1-202ENST00000380409 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.9□□□□□ -1.3
RIPK1-202ENST00000380409 PVALEFA0A1B0GWK0 134 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 CAPN14A8MX76 684 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 KCNK3O14649 394 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.31
RIPK1-202ENST00000380409 ADCY6O43306 1168 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 GUCY1B2O75343 617 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 USP1O94782 785 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 RBP3P10745 1247 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 GUCY1A2P33402 732 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 BTKQ06187 659 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 STRN3Q13033 797 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.31
RIPK1-202ENST00000380409 DHX34Q14147 1143 aaKnown RBP6.9□□□□□ -1.31
RIPK1-202ENST00000380409 EXOC3L4Q17RC7 722 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 TRMT5Q32P41 509 aaKnown RBP6.9□□□□□ -1.31
RIPK1-202ENST00000380409 NAALADL2Q58DX5 795 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 MAP3K21Q5TCX8 1036 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 RHBDF2Q6PJF5 856 aa6.9□□□□□ -1.31
RIPK1-202ENST00000380409 CNOT6LQ96LI5 555 aaKnown RBP6.9□□□□□ -1.31
RIPK1-202ENST00000380409 CLSTN3Q9BQT9 956 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms