RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 HGSNATQ68CP4 663 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 FAM109BQ6ICB4 259 aaPredicted RBP16.04■□□□□ 0.16
RPP40-202ENST00000380051 CYP26C1Q6V0L0 522 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 ZNF677Q86XU0 584 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 SLC4A11Q8NBS3 891 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 ACBD6Q9BR61 282 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 TTPALQ9BTX7 342 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 OXCT2Q9BYC2 517 aaPredicted RBP16.04■□□□□ 0.16
RPP40-202ENST00000380051 HAUS4Q9H6D7 363 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 CDH9Q9ULB4 789 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 KIAA1671Q9BY89 1806 aa16.04■□□□□ 0.16
RPP40-202ENST00000380051 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 H7C4K7 107 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 FGF18O76093 207 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 PDGFRBP09619 1106 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 VDRP11473 427 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 SKILP12757 684 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 GNA15P30679 374 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
RPP40-202ENST00000380051 ANKS3Q6ZW76 656 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 SLC47A2Q86VL8 602 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
RPP40-202ENST00000380051 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 CHST7Q9NS84 486 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 HMGXB4Q9UGU5 601 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
RPP40-202ENST00000380051 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 C5orf67F2Z3F1 127 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 CA3P07451 260 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 MYOGP15173 224 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 ANXA13P27216 316 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 CTNNB1P35222 781 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 TDRD12Q587J7 1177 aaKnown RBP16.03■□□□□ 0.16
RPP40-202ENST00000380051 TAS1R1Q7RTX1 841 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 ACOT1Q86TX2 421 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 VPS36Q86VN1 386 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 EPS8L1Q8TE68 723 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 ZNF606Q8WXB4 792 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
RPP40-202ENST00000380051 CHP1Q99653 195 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 ARHGAP20Q9P2F6 1191 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
RPP40-202ENST00000380051 VWA8A3KMH1 1905 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 THAP12O43422 761 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 MED7O43513 233 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 CD19P15391 556 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 PTPN1P18031 435 aaKnown RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 CDR2Q01850 454 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 DSG1Q02413 1049 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 STILQ15468 1287 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 SGO2Q562F6 1265 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 ZNF280DQ6N043 979 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 KIAA1841Q6NSI8 718 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 ZNF571Q7Z3V5 609 aaPredicted RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 TMEM139Q8IV31 216 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 PIK3R5Q8WYR1 880 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 CCDC42Q96M95 316 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 AGPAT1Q99943 283 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 RTP3Q9BQQ7 232 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 SYT15Q9BQS2 421 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 VN1R3Q9BXE9 311 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 PRO3102Q9H379 93 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 ACP6Q9NPH0 428 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 NOCTQ9UK39 431 aaKnown RBP16.02■□□□□ 0.15
RPP40-202ENST00000380051 SSX2IPQ9Y2D8 614 aa16.02■□□□□ 0.15
RPP40-202ENST00000380051 NLRC5Q86WI3 1866 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 GBF1Q92538 1859 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 TNRC18O15417 2968 aaPredicted RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 TSC2P49815 1807 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 OR6C75A6NL08 312 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 EIF4A3P38919 411 aaKnown RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 ERVK-21P61565 698 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 TSPY1Q01534 308 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 UBE3AQ05086 875 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 ORC1Q13415 861 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 BMS1Q14692 1282 aaKnown RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 CNGA2Q16280 664 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 CTXN3Q4LDR2 81 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 RTP2Q5QGT7 225 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 ARHGAP17Q68EM7 881 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 B3GALNT2Q8NCR0 500 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 LNX1Q8TBB1 728 aaPredicted RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 DDX1Q92499 740 aaKnown RBP16.01■□□□□ 0.15
RPP40-202ENST00000380051 C17orf80Q9BSJ5 609 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 SYT11Q9BT88 431 aa16.01■□□□□ 0.15
RPP40-202ENST00000380051 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms