RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TFAP2BQ92481 460 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 MAML3Q96JK9 1138 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 HEXIM2Q96MH2 286 aaKnown RBP11.44□□□□□ -0.58
NEDD9-201ENST00000379433 ZSWIM1Q9BR11 485 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 CCDC113Q9H0I3 377 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 IFT122Q9HBG6 1241 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 FAM49BQ9NUQ9 324 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 SPATA7Q9P0W8 599 aa11.44□□□□□ -0.58
NEDD9-201ENST00000379433 ACKR2O00590 384 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 HCRTO43612 131 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 C22orf31O95567 290 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SYF2O95926 243 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PYGLP06737 847 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 RGS7P49802 495 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SNRPFP62306 86 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 NFX1Q12986 1120 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 CST9Q5W186 159 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 CCDC137Q6PK04 289 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 AENQ8WTP8 325 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SLX1AQ9BQ83 275 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SAE1Q9UBE0 346 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 IGF2BP3O00425 579 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GRIN3BO60391 1043 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 NPTXRO95502 500 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 IMPDH2P12268 514 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 CTNNA1P35221 906 aaKnown RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 MBTD1Q05BQ5 628 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 IFFO1Q0D2I5 559 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ANKRD13BQ86YJ7 626 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ZDHHC14Q8IZN3 488 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GABPB2Q8TAK5 448 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PWWP2AQ96N64 755 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ZIC5Q96T25 663 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SNTG2Q9NY99 539 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ASIC3Q9UHC3 531 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 STXBP5LQ9Y2K9 1186 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 F8VP50 259 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 C6orf222P0C671 652 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PTENP60484 403 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ADCY1Q08828 1119 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 SGO2Q562F6 1265 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 ZNF667Q5HYK9 610 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GSTA5Q7RTV2 222 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PLPPR4Q7Z2D5 763 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GIMAP7Q8NHV1 300 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 LRRN4Q8WUT4 740 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 FLRT1Q9NZU1 646 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 GTF3C4Q9UKN8 822 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 INTUQ9ULD6 942 aa11.43□□□□□ -0.58
NEDD9-201ENST00000379433 PTPRFP10586 1907 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 A0A0A6YYK5 440 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 AGPSO00116 658 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 IFNB1P01574 187 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ZNF792Q3KQV3 632 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 SLFN11Q7Z7L1 901 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 CCDC33Q8N5R6 958 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TWNKQ96RR1 684 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PARK7Q99497 189 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 RNF14Q9UBS8 474 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TTC7AQ9ULT0 858 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 NENFQ9UMX5 172 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PARP14Q460N5 1801 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ZNFX1Q9P2E3 1918 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 MAPK13O15264 365 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 HOXC6P09630 235 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ACO1P21399 889 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TAS2R40P59535 323 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 UBAP2Q5T6F2 1119 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 LIN9Q5TKA1 542 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PAF1Q8N7H5 531 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 C1orf127Q8N9H9 656 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 FLCNQ8NFG4 579 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 SLC39A3Q9BRY0 314 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 HERPUD2Q9BSE4 406 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 C16orf70Q9BSU1 422 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 EIF2AQ9BY44 585 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 CPSF3Q9UKF6 684 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PIN4Q9Y237 131 aaKnown RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 SNX9Q9Y5X1 595 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 NCANO14594 1321 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 MROH7Q68CQ1 1323 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 LCTP09848 1927 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PPEF2O14830 753 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PGK1P00558 417 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms