RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 MAGEB3O15480 346 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 RNASEH1O60930 286 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PPP2R5CQ13362 524 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CBWD2Q8IUF1 395 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CCDC33Q8N5R6 958 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CCDC197Q8NCU1 140 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CPA5Q8WXQ8 436 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 BSNDQ8WZ55 320 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 HAUS1Q96CS2 278 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 RNF146Q9NTX7 359 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 DMAC2Q9NW81 257 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CCPG1Q9ULG6 757 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GABRQQ9UN88 632 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 NCANO14594 1321 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 DUSP11O75319 330 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GCNT3O95395 438 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CD48P09326 243 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 KRT13P13646 458 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CALML3P27482 149 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 IKQ13123 557 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 LRRC6Q86X45 466 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PPM1KQ8N3J5 372 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 MAGEC3Q8TD91 643 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CKAP2Q8WWK9 683 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 AK8Q96MA6 479 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 RNF208Q9H0X6 261 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ACBD3Q9H3P7 528 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 UNC5CO95185 931 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PARNO95453 639 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GNA14O95837 355 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 TUBBP07437 444 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 RARBP10826 455 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ADRA1DP25100 572 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CTGFP29279 349 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 BMP8BP34820 402 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SATB1Q01826 763 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SNX17Q15036 470 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 DUS1LQ6P1R4 473 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ALYREFQ86V81 257 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 UNC5BQ8IZJ1 945 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SAAL1Q96ER3 474 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 DAAM1Q9Y4D1 1078 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CITO14578 2027 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 MYLKQ15746 1914 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GNAT1P11488 350 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PCSK6P29122 969 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GCKP35557 465 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SOX5P35711 763 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 GPR153Q6NV75 609 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SYT2Q8N9I0 419 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CCDC26Q8TAB7 109 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 TUBGCP5Q96RT8 1024 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ARHGAP39Q9C0H5 1083 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 AGPAT3Q9NRZ7 376 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 HMX2A2RU54 273 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ZCCHC18P0CG32 403 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 SP100P23497 879 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 COILP38432 576 aaPredicted RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 FBXO11Q86XK2 927 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 RPUSD2Q8IZ73 545 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ANKRD35Q8N283 1001 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 TRIB2Q92519 343 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 CDHR1Q96JP9 859 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 ZNF778Q96MU6 729 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 NAP1L4Q99733 375 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 TUT1Q9H6E5 874 aaKnown RBP7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 KIAA1586Q9HCI6 787 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 C2CD2Q9Y426 696 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 LRRC42Q9Y546 428 aa7.79□□□□□ -1.16
GPCPD1-201ENST00000379019 A6NJR5 290 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 PIK3CDO00329 1044 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 PPP1R12AO14974 1030 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 ZBTB5O15062 677 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 SSTR1P30872 391 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 KRT17Q04695 432 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 KPNB1Q14974 876 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 TSR1Q2NL82 804 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 TAF1BQ53T94 588 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 GALNT17Q6IS24 598 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 PASD1Q8IV76 773 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 NAF1Q96HR8 494 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 DYDC2Q96IM9 177 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 RIC8AQ9NPQ8 531 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 SEC63Q9UGP8 760 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 USP15Q9Y4E8 981 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 BMP15O95972 392 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 FOSP01100 380 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 CUL1Q13616 776 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 FNBP1LQ5T0N5 605 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 FBXL19Q6PCT2 694 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 SH2D5Q6ZV89 423 aa7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 PRPF39Q86UA1 669 aaKnown RBP7.78□□□□□ -1.16
GPCPD1-201ENST00000379019 MTDHQ86UE4 582 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms