RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MYO1FO00160 1098 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 MGEA5O60502 916 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 MICAL2O94851 1124 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 SEC31AO94979 1220 aaKnown RBP18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 CNGA2Q16280 664 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 PTPN20Q4JDL3 420 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 AADACL2Q6P093 401 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 ERICH1Q86X53 443 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 LPPQ93052 612 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 PARVAQ9NVD7 372 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 TJP2Q9UDY2 1190 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 PCDHA3Q9Y5H8 950 aa18.41■□□□□ 0.54
THUMPD2-201ENST00000378727 A0A1W2PQ45 241 aaPredicted RBP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 A0A1W2PQY0 241 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ITGA4P13612 1032 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ATF7P17544 494 aaPredicted RBP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 AFF1P51825 1210 aaKnown RBP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 SGO2Q562F6 1265 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ZNF618Q5T7W0 954 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 CYP4A22Q5TCH4 519 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 AP1M1Q9BXS5 423 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 TRPV6Q9H1D0 765 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 DMGDHQ9UI17 866 aaKnown RBP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 KPNA7A9QM74 516 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ZMYND10O75800 440 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 PROSCO94903 275 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ZRANB2O95218 330 aaKnown RBP eCLIP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 FGGP02679 453 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 MLH1P40692 756 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 PRMT2P55345 433 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 RPL7AP62424 266 aaKnown RBP18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 PAK2Q13177 524 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 DSC3Q14574 896 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ARHGEF6Q15052 776 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 C12orf29Q8N999 325 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 FEZF2Q8TBJ5 459 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 ZNF560Q96MR9 790 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 GDAP2Q9NXN4 497 aa18.4■□□□□ 0.54
THUMPD2-201ENST00000378727 CCDC66A2RUB6 948 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 M0QYV0 167 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 TUBBP07437 444 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 LRPAP1P30533 357 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 GPD2P43304 727 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 PPP1R15BQ5SWA1 713 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 DAB2IPQ5VWQ8 1189 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 AGMOQ6ZNB7 445 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 MRPL10Q7Z7H8 261 aaKnown RBP18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 SLC43A3Q8NBI5 491 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 KBTBD7Q8WVZ9 684 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 GAD1Q99259 594 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 KRT12Q99456 494 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 HINFPQ9BQA5 517 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 KIAA1257Q9ULG3 409 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
THUMPD2-201ENST00000378727 TMEM191CA6NGB0 347 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 HCRTO43612 131 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 PYGMP11217 842 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 IGFBP6P24592 240 aaPredicted RBP18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 PNPLA4P41247 253 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 SLC1A1P43005 524 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 TAF6P49848 677 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 SLC7A5Q01650 507 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 C8orf74Q6P047 294 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 ACOT1Q86TX2 421 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 HNRNPLLQ8WVV9 542 aaKnown RBP18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 NR2E1Q9Y466 385 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 KRIT1O00522 736 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 FGFR1P11362 822 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 LILRA4P59901 499 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 ZNF252P-AS1Q0IIN9 211 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 CCDC70Q6NSX1 233 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 DNAJC24Q6P3W2 148 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 UBA3Q8TBC4 463 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 SH3TC2Q8TF17 1288 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 CACNG4Q9UBN1 327 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 TSPAN16Q9UKR8 245 aa18.38■□□□□ 0.53
THUMPD2-201ENST00000378727 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 ZNF623O75123 536 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 ERBB2P04626 1255 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 PFKMP08237 780 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 CKBP12277 381 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 OGDHQ02218 1023 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 LONRF2Q1L5Z9 754 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 SV2CQ496J9 727 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 GLE1Q53GS7 698 aaKnown RBP18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 UNC93AQ86WB7 457 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms