RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CAPRIN2Q6IMN6 1127 aaKnown RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 SLC30A9Q6PML9 568 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 CROCCP2Q86T23 111 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 NT5DC4Q86YG4 428 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 PASD1Q8IV76 773 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 TTC39CQ8N584 583 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 AFG1LQ8WV93 481 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 SLCO2A1Q92959 643 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 SCLT1Q96NL6 688 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 TRIM51Q9BSJ1 452 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ABHD16BQ9H3Z7 469 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 STRIP2Q9ULQ0 834 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 RRN3P2A6NIE6 340 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 H3BRB1 525 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 TLR3O15455 904 aaKnown RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 CALCAP01258 141 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 PAEPP09466 180 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 MYZAPP0CAP1 466 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 CDH5P33151 784 aaPredicted RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 IRF5Q13568 498 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 GRB14Q14449 540 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 DUSP28Q4G0W2 176 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 SGO2Q562F6 1265 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ACBD5Q5T8D3 534 aaPredicted RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 EEF1DP3Q658K8 133 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 GPR142Q7Z601 462 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 PLEKHH3Q7Z736 793 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ZNF410Q86VK4 478 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 UBLCP1Q8WVY7 318 aaPredicted RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 BRI3BPQ8WY22 251 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ADPGKQ9BRR6 497 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 IFT122Q9HBG6 1241 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 STAG3L1P0CL83 205 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 RARAP10276 462 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SLC8A3P57103 927 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 LACTBP83111 547 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 SKOR1P84550 965 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 FAM110CQ1W6H9 321 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 AADACL2Q6P093 401 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 MTHFD1LQ6UB35 978 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 RBM12BQ8IXT5 1001 aaKnown RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 KATNAL2Q8IYT4 538 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ARFGAP2Q8N6H7 521 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 C18orf8Q96DM3 657 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ATP6V1G3Q96LB4 118 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 TRIM31Q9BZY9 425 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 CYP3A43Q9HB55 503 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 A0A087WZ62 844 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SLC15A5A6NIM6 579 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 B4GALT5O43286 388 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 RTN3O95197 1032 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 HOXD8P13378 290 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 CD58P19256 250 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ADCYAP1R1P41586 468 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 OSTNP61366 133 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 USP4Q13107 963 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SLMAPQ14BN4 828 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SNCBQ16143 134 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 DGKDQ16760 1214 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 DNAJC24Q6P3W2 148 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 B4GALNT4Q76KP1 1039 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ERICH1Q86X53 443 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 EXD1Q8NHP7 514 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ARL8AQ96BM9 186 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 FDXACB1Q9BRP7 624 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 TINF2Q9BSI4 451 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 C16orf70Q9BSU1 422 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 KATNBL1Q9H079 304 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 NEUROG2Q9H2A3 272 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 LHX5Q9H2C1 402 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 LMCD1Q9NZU5 365 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ANK1P16157 1881 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 GOLGA6L7A0A1B0GV03 622 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SHOX2O60902 331 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 GJB1P08034 283 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 KRT19P08727 400 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 CXCL8P10145 99 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 CALCOCO2Q13137 446 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 PPP1R7Q15435 360 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SIX1Q15475 284 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 TTMPQ5BVD1 217 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 TMEM63BQ5T3F8 832 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 EMC10Q5UCC4 262 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 LRRC38Q5VT99 294 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 MAP1SQ66K74 1059 aaPredicted RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 OR6J1Q8NGC5 347 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 DDX27Q96GQ7 796 aaKnown RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
UBR4-202ENST00000375224 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 PLEKHG4BQ96PX9 1271 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 CAPS2Q9BXY5 557 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms