RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PCDH8O95206 1070 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 DGKZQ13574 1117 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 OVGP1Q12889 678 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 KIAA2013Q8IYS2 634 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PPP1R14AQ96A00 147 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 ATG4CQ96DT6 458 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 MED15Q96RN5 788 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PALMDQ9NP74 551 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 GUCA1CO95843 209 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 MLH1P40692 756 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 HARS2P49590 506 aaKnown RBP15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 XKR3Q5GH77 459 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 OOSP2Q86WS3 158 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 CSGALNACT1Q8TDX6 532 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 SEPT1Q8WYJ6 367 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 GPATCH2LQ9NWQ4 482 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PHF2O75151 1096 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 NDUFS2O75306 463 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 SKOR1P84550 965 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 IYDQ6PHW0 289 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PLD3Q8IV08 490 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 TEDDM1Q5T9Z0 273 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 HPDLQ96IR7 371 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 MYOZ2Q9NPC6 264 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 ARHGEF9O43307 516 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 CST8O60676 142 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 UBTFL6P0CB48 400 aaPredicted RBP15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 MAGEA9P43362 315 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 CDH18Q13634 790 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 CHI3L2Q15782 390 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 SGSM1Q2NKQ1 1148 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 ENOSF1Q7L5Y1 443 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 STKLD1Q8NE28 680 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 MDM1Q8TC05 714 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 NT5C1AQ9BXI3 368 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 ZFYVE1Q9HBF4 777 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 CDYLQ9Y232 598 aa15.35■□□□□ 0.05
NOTCH4-201ENST00000375023 KDM1AO60341 852 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 CCDC22O60826 627 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 AP1G2O75843 785 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 ATP5HO75947 161 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 GLRBP48167 497 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 FXR1P51114 621 aaKnown RBP eCLIP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 TAP1Q03518 808 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 PRPF39Q86UA1 669 aaKnown RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 MRPL1Q9BYD6 325 aaKnown RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 RAD51CO43502 376 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 ITGA8P53708 1063 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 MRPS15P82914 257 aaKnown RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 GPRC5AQ8NFJ5 357 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 OSGEPL1Q9H4B0 414 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF556Q9HAH1 456 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 MRPL40Q9NQ50 206 aaKnown RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 H2AFY2Q9P0M6 372 aaPredicted RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 KRT87PA6NCN2 255 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 STXBP3O00186 592 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 PCYT1AP49585 367 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 GRIN1Q05586 938 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 RALGDSQ12967 914 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 GLB1LQ6UWU2 654 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 APOL2Q9BQE5 337 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 PDHBP11177 359 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 CNBD2Q96M20 576 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 TRIM62Q9BVG3 475 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 STK33Q9BYT3 514 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 NCALDP61601 193 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 PLEKHA8Q96JA3 519 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 PHF20Q9BVI0 1012 aa15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 CINPQ9BW66 212 aaPredicted RBP15.34■□□□□ 0.05
NOTCH4-201ENST00000375023 M0QYT0 321 aa15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 SOX10P56693 466 aa15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 DHX34Q14147 1143 aaKnown RBP15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 KYNUQ16719 465 aa15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 WWP1Q9H0M0 922 aa15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF609O15014 1411 aa15.33■□□□□ 0.05
NOTCH4-201ENST00000375023 PDXKO00764 312 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 DGAT1O75907 488 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 SRP72O76094 671 aaKnown RBP15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 HDAC4P56524 1084 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 EME1Q96AY2 570 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 BPIFA3Q9BQP9 254 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 EFCAB14O75071 495 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 GPD1P21695 349 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 TRPC1P48995 793 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 INPP5AQ14642 412 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 NT5DC4Q86YG4 428 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms