RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-202ENST00000374876 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
CCDC40-202ENST00000374876 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.24
CCDC40-202ENST00000374876 PADI3Q9ULW8 664 aa16.52■□□□□ 0.24
CCDC40-202ENST00000374876 LRRIQ4A6NIV6 560 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.23
CCDC40-202ENST00000374876 PHF2O75151 1096 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 ERLIN2O94905 339 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 CHRNA3P32297 505 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 FLT3P36888 993 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 NAMPTP43490 491 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 CLEC16AQ2KHT3 1053 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 C15orf39Q6ZRI6 1047 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 TMC3Q7Z5M5 1100 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 ZNF516Q92618 1163 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 CD101Q93033 1021 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 BTBD6Q96KE9 485 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 FMO2Q99518 471 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 RSPH14Q9UHP6 348 aa16.52■□□□□ 0.23
CCDC40-202ENST00000374876 K7ERI5 159 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 EIF3HO15372 352 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 EIF4BP23588 611 aaKnown RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 ATP1A2P50993 1020 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 CLDN10P78369 228 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 DHX9Q08211 1270 aaKnown RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 DUPD1Q68J44 220 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 TTC19Q6DKK2 380 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 JAMLQ86YT9 394 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 FAM84AQ96KN4 292 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
CCDC40-202ENST00000374876 STYXL1Q9Y6J8 313 aa16.51■□□□□ 0.23
CCDC40-202ENST00000374876 ZBBXA8MT70 800 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 ASAP2O43150 1006 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PFKMP08237 780 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 DARSP14868 501 aaKnown RBP16.5■□□□□ 0.23
CCDC40-202ENST00000374876 NR1D1P20393 614 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 ACOT2P49753 483 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 BIRC3Q13489 604 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 CAPSQ13938 189 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 ZACNQ401N2 412 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 SLFN12LQ6IEE8 588 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 CNKSR3Q6P9H4 555 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 FAM228AQ86W67 206 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 SEPT8Q92599 483 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 MAGOHBQ96A72 148 aaKnown RBP16.5■□□□□ 0.23
CCDC40-202ENST00000374876 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
CCDC40-202ENST00000374876 MINDY3Q9H8M7 445 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 ST3GAL5Q9UNP4 418 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PCDHA3Q9Y5H8 950 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 LAMA2P24043 3122 aaKnown RBP16.5■□□□□ 0.23
CCDC40-202ENST00000374876 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PYGMP11217 842 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 CTNNA2P26232 953 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 BPIFB4P59827 614 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 IKBKEQ14164 716 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 ZNF410Q86VK4 478 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 TDHQ8IZJ6 230 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PRELID2Q8N945 189 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 OR2W6PQ8NHA6 318 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
CCDC40-202ENST00000374876 PCDHB2Q9Y5E7 798 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 NFS1Q9Y697 457 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
CCDC40-202ENST00000374876 LDHAP00338 332 aaKnown RBP16.49■□□□□ 0.23
CCDC40-202ENST00000374876 RWDD2BP57060 319 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 PDCLQ13371 301 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 TDRD10Q5VZ19 366 aaKnown RBP16.49■□□□□ 0.23
CCDC40-202ENST00000374876 ZNF677Q86XU0 584 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
CCDC40-202ENST00000374876 CALCAP01258 141 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 PIGRP01833 764 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
CCDC40-202ENST00000374876 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC40-202ENST00000374876 TMCO2Q7Z6W1 182 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-202ENST00000374876 EFCAB13Q8IY85 973 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 BCAS4Q8TDM0 211 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 KCNN1Q92952 543 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 PCYOX1Q9UHG3 505 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 PODXLO00592 558 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 GPR182O15218 404 aa16.48■□□□□ 0.23
CCDC40-202ENST00000374876 UNGP13051 313 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms