RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 KIF1BO60333 1816 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 GOLGA8QA0A0J9YX86 632 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 GOLGA8OA6NCC3 632 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 GOLGA8NF8WBI6 632 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 DNALI1O14645 258 aaPredicted RBP16.1■□□□□ 0.17
SRPK1-204ENST00000373825 IL10P22301 178 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 MSX2P35548 267 aaPredicted RBP16.1■□□□□ 0.17
SRPK1-204ENST00000373825 SLC5A3P53794 718 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 UBE3AQ05086 875 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 GABPAQ06546 454 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 MAPK6Q16659 721 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
SRPK1-204ENST00000373825 FRMD5Q7Z6J6 570 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 SLFN12Q8IYM2 578 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 DQX1Q8TE96 717 aaKnown RBP16.1■□□□□ 0.17
SRPK1-204ENST00000373825 CNDP1Q96KN2 507 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 PAFAH2Q99487 392 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 FAM96AQ9H5X1 160 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 SIK3Q9Y2K2 1263 aa16.1■□□□□ 0.17
SRPK1-204ENST00000373825 ZBED1O96006 694 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 JAK1P23458 1154 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ARPP19P56211 112 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ZCCHC23Q6ZST2 131 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 BNIPLQ7Z465 357 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ANKRD23Q86SG2 305 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 PBXIP1Q96AQ6 731 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 VPS50Q96JG6 964 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 WHRNQ9P202 907 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 BAG5Q9UL15 447 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CDC42BPBQ9Y5S2 1711 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SAC3D1A6NKF1 404 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SPDYE16A6NNV3 312 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 AGRPO00253 132 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CDC16Q13042 620 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ZC2HC1CQ53FD0 456 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 BRDTQ58F21 947 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 GPR107Q5VW38 600 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 DNAAF3Q8N9W5 541 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 GPATCH1Q9BRR8 931 aaKnown RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 LIN28AQ9H9Z2 209 aaKnown RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 IL1RL2Q9HB29 575 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 DNAJC16Q9Y2G8 782 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CSPG5O95196 566 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 PON1P27169 355 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SSTR1P30872 391 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SNX16P57768 344 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SH3D19Q5HYK7 790 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CCDC81Q6ZN84 652 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ALYREFQ86V81 257 aaKnown RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SUN5Q8TC36 379 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 EDF1O60869 148 aaKnown RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 TSC22D2O75157 780 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CHKAP35790 457 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SYDE1Q6ZW31 735 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 SH3RF3Q8TEJ3 882 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
SRPK1-204ENST00000373825 CITED4Q96RK1 184 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 TRPC7Q9HCX4 862 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 NR2E1Q9Y466 385 aa16.09■□□□□ 0.17
SRPK1-204ENST00000373825 ZBTB11O95625 1053 aaPredicted RBP16.08■□□□□ 0.17
SRPK1-204ENST00000373825 TFPTP0C1Z6 253 aa16.08■□□□□ 0.17
SRPK1-204ENST00000373825 YARSP54577 528 aaKnown RBP16.08■□□□□ 0.17
SRPK1-204ENST00000373825 PKNOX1P55347 436 aa16.08■□□□□ 0.17
SRPK1-204ENST00000373825 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.17
SRPK1-204ENST00000373825 CPA5Q8WXQ8 436 aa16.08■□□□□ 0.17
SRPK1-204ENST00000373825 FUT4P22083 530 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 CSE1LP55060 971 aaKnown RBP16.08■□□□□ 0.16
SRPK1-204ENST00000373825 MIIPQ5JXC2 388 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 DENND5BQ6ZUT9 1274 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 C12orf65Q9H3J6 166 aaKnown RBP16.08■□□□□ 0.16
SRPK1-204ENST00000373825 PEX2P28328 305 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 NMT1P30419 496 aaKnown RBP16.08■□□□□ 0.16
SRPK1-204ENST00000373825 LDLRAP1Q5SW96 308 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 C16orf89Q6UX73 402 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 ATG14Q6ZNE5 492 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
SRPK1-204ENST00000373825 NUDT12Q9BQG2 462 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 SPHKAPQ2M3C7 1700 aa16.08■□□□□ 0.16
SRPK1-204ENST00000373825 MAGP20916 626 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 NUP93Q8N1F7 819 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 CLEC4FQ8N1N0 589 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-204ENST00000373825 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
SRPK1-204ENST00000373825 PCDH18Q9HCL0 1135 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 EPB41L4AQ9HCS5 686 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-204ENST00000373825 HACD3Q9P035 362 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 TFE3P19532 575 aaPredicted RBP16.07■□□□□ 0.16
SRPK1-204ENST00000373825 CLK1P49759 484 aaKnown RBP16.07■□□□□ 0.16
SRPK1-204ENST00000373825 AQP4P55087 323 aa16.07■□□□□ 0.16
SRPK1-204ENST00000373825 NET1Q7Z628 596 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms