RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 KHDC1Q4VXA5 237 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 TNFAIP8L3Q5GJ75 292 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 WDR44Q5JSH3 913 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 RFWD3Q6PCD5 774 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 FAM210AQ96ND0 272 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 TXNRD2Q9NNW7 524 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PRRC2BQ5JSZ5 2229 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 DCTN3O75935 186 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 C6orf222P0C671 652 aaPredicted RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 HSPA6P17066 643 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 RARRES1P49788 294 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 CDR2Q01850 454 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 KRT17Q04695 432 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 TRPC3Q13507 836 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 CLUL1Q15846 466 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 RFX8Q6ZV50 586 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 C4orf19Q8IY42 314 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ART4Q93070 314 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PCYOX1Q9UHG3 505 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 CAPN9O14815 690 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 OATP04181 439 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 TAF1BQ53T94 588 aaPredicted RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 STMN2Q93045 179 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 C9orf72Q96LT7 481 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 HSD17B14Q9BPX1 270 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 SIX2Q9NPC8 291 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ZFP69BQ9UJL9 534 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 VAV3Q9UKW4 847 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 SPATA31C1P0DKV0 1188 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 PYGMP11217 842 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 COMTP21964 271 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 TNFAIP2Q03169 654 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 OR52E8Q6IFG1 317 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 CAPN12Q6ZSI9 719 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 GPR142Q7Z601 462 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 RNF149Q8NC42 400 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ADPGKQ9BRR6 497 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 CYP26B1Q9NR63 512 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 NAALADL1Q9UQQ1 740 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 NCANO14594 1321 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM88BA6NKF7 163 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 SMAPO00193 183 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 KRT36O76013 467 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 PYGBP11216 843 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 PLS3P13797 630 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DESP17661 470 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 MUTP22033 750 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ANXA13P27216 316 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 HOXD10P28358 340 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 RGS2P41220 211 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 JAM2P57087 298 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 CCDC15Q0P6D6 951 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 EMC2Q15006 297 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 WASHC2DQ5SRD0 308 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 SLC35C1Q96A29 364 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 MCUR1Q96AQ8 359 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 LENG9Q96B70 501 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ZSWIM1Q9BR11 485 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DCTN4Q9UJW0 460 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 KNL1Q8NG31 2342 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 CREB3O43889 395 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 GSTT1P30711 240 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 FCGRTP55899 365 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 MAPK6Q16659 721 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DEFB115Q30KQ5 88 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 DPY19L2P1Q6NXN4 242 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 TRIM74Q86UV6 250 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 TRIM73Q86UV7 250 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms