RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TRIM67Q6ZTA4 783 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ARHGAP27Q6ZUM4 889 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 HS2ST1Q7LGA3 356 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SATL1Q86VE3 508 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 VPS52Q8N1B4 723 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 AGGF1Q8N302 714 aaeCLIP5.72□□□□□ -1.493e-7■■■■□ 19.7
ATG4A-204ENST00000372246 POU5F2Q8N7G0 328 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SNRNP27Q8WVK2 155 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MCUR1Q96AQ8 359 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC124Q96CT7 223 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ERLEC1Q96DZ1 483 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC97Q96F63 343 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ACAP3Q96P50 834 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SETDB2Q96T68 719 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 NDNQ99608 321 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 C11orf70Q9BRQ4 267 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 WDR83Q9BRX9 315 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM120AQ9BXJ8 343 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ROPN1BQ9BZX4 212 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RANBP17Q9H2T7 1088 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC19Q9H756 370 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SMYD3Q9H7B4 428 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ROPN1Q9HAT0 212 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 METTL14Q9HCE5 456 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CD209Q9NNX6 404 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 EURLQ9NYK6 297 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SCOCQ9UIL1 159 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 NEU2Q9Y3R4 380 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TELO2Q9Y4R8 837 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SCN7AQ01118 1682 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ROBO3Q96MS0 1386 aa5.71□□□□□ -1.49
ATG4A-204ENST00000372246 TAF1LQ8IZX4 1826 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 A0A1B0GTW7 788 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 F5H423 210 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 FSCN2O14926 492 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 GRIN3BO60391 1043 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 AVILO75366 819 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PDE5AO76074 875 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 LYNP07948 512 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CYP11B1P15538 503 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ACADSP16219 412 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ITIH2P19823 946 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 FUT4P22083 530 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 RASSF2P50749 326 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ARSEP51690 589 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 VAMP7P51809 220 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 GDF10P55107 478 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 RPL7AP62424 266 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PLCB3Q01970 1234 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 TRAF1Q13077 416 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 UBAP2LQ14157 1087 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 DDB1Q16531 1140 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SMTNL2Q2TAL5 461 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SEZ6Q53EL9 994 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 FNBP1LQ5T0N5 605 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SPRYD7Q5W111 196 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CDHR3Q6ZTQ4 885 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CYFIP1Q7L576 1253 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 IGDCC3Q8IVU1 814 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MFN1Q8IWA4 741 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 RIBC1Q8N443 379 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CERS5Q8N5B7 392 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CCDC33Q8N5R6 958 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ENDOVQ8N8Q3 282 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MAIP1Q8WWC4 291 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 RUNDC3BQ96NL0 473 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 GBP5Q96PP8 586 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 FAM111AQ96PZ2 611 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 THTPAQ9BU02 230 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 KCNK13Q9HB14 408 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PARVGQ9HBI0 331 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 DDX18Q9NVP1 670 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 POLLQ9UGP5 575 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 LAMB1P07942 1786 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ARFGEF1Q9Y6D6 1849 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 DOT1LQ8TEK3 1739 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MIF4GDA9UHW6 222 aaKnown RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 B2RBV5 119 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 C6orf229H3BNL8 230 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 LIN7AO14910 233 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 TYROBPO43914 113 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 HAUS5O94927 633 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 SNHG28P0DPA3 235 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MYL2P10916 166 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CYP3A7P24462 503 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ADSSP30520 456 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 MAGEA10P43363 369 aaPredicted RBP5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ARL4CP56559 192 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 CUL3Q13618 768 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 ACVR2BQ13705 512 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 PDK4Q16654 411 aa5.71□□□□□ -1.5
ATG4A-204ENST00000372246 Q3C1V9 767 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms