RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ASAP2O43150 1006 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TRAPPC3O43617 180 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 DGAT1O75907 488 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ATP2A2P16615 1042 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ARF4P18085 180 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 LONP1P36776 959 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 PBX1P40424 430 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 NPEPPSP55786 919 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FZD5Q13467 585 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TTC38Q5R3I4 469 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 EFCAB12Q6NXP0 572 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 RSPO2Q6UXX9 243 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 DDX53Q86TM3 631 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 IQCF2Q8IXL9 164 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 RIN2Q8WYP3 895 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TBC1D31Q96DN5 1066 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 SNX27Q96L92 541 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 HAPLN3Q96S86 360 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 C7orf25Q9BPX7 421 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 IFIH1Q9BYX4 1025 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 PHACTR1Q9C0D0 580 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ZSWIM4Q9H7M6 989 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FNIP2Q9P278 1114 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TNFSF13BQ9Y275 285 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ANHXE9PGG2 379 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 BIRC5O15392 142 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CCNT1O60563 726 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 MOSPD3O75425 235 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ALDH2P05091 517 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CYP11A1P05108 521 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 RPSAP08865 295 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 FGFR1P11362 822 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 GNAZP19086 355 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CMA1P23946 247 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ADAM9Q13443 819 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 E2F5Q15329 346 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 UPP1Q16831 310 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 LETM2Q2VYF4 491 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF707Q96C28 371 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 SMC6Q96SB8 1091 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 RNF39Q9H2S5 420 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 C2CD2Q9Y426 696 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 INSL6Q9Y581 213 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 TTC26A0AVF1 554 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ABLIM3O94929 683 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 DESP17661 470 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PSMD7P51665 324 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 DLX2Q07687 328 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 BCL2A1Q16548 175 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 FAM102BQ5T8I3 360 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 FAM160B1Q5W0V3 765 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ANO7Q6IWH7 933 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 SYCE2Q6PIF2 218 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ERICH1Q86X53 443 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 EFHBQ8N7U6 833 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 EIF1ADQ8N9N8 165 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PLEKHO2Q8TD55 490 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PRPF31Q8WWY3 499 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 RAD54LQ92698 747 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PABPC5Q96DU9 382 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 SERTAD1Q9UHV2 236 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 PUF60Q9UHX1 559 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CPSF3Q9UKF6 684 aaKnown RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 ITIH6Q6UXX5 1313 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 A0A1B0GVG6 124 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 BMP6P22004 513 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CLCN3P51790 818 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 POLGP54098 1239 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 EIF4EBP2Q13542 120 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM192Q8IY95 271 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 DPF3Q92784 378 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CENPTQ96BT3 561 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 DHRS1Q96LJ7 313 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 SLC12A6Q9UHW9 1150 aa7.32□□□□□ -1.24
CSDE1-204ENST00000369530 CFAP54Q96N23 3096 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 PTPRJQ12913 1337 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 A0A0B4J269 797 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 C2orf71A6NGG8 1288 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 HMGB1P1B2RPK0 211 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 PIRO00625 290 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 B4GALT5O43286 388 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 TGFB1I1O43294 461 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 MICAL2O94851 1124 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 VTNP04004 478 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 FCARP24071 287 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 KRT9P35527 623 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 RPL34P49207 117 aaKnown RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CASP5P51878 434 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CKAP4Q07065 602 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms