RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 LIN28AQ9H9Z2 209 aaKnown RBP13.79□□□□□ -0.2
NCSTN-202ENST00000368063 UBR2Q8IWV8 1755 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 RBP3P10745 1247 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 CPOXP36551 454 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 CABP4P57796 275 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PRKD1Q15139 912 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 TMEM214Q6NUQ4 689 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 SAMD3Q8N6K7 520 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 ATG4AQ8WYN0 398 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 C1orf21Q9H246 121 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MYH11P35749 1972 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PAPPAQ13219 1627 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 GSTTP1A0A1W2PQM5 241 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 GOLGA8TH3BQL2 631 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 IPO5O00410 1097 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 XPOTO43592 962 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PLS3P13797 630 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 GYS1P13807 737 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 KRT4P19013 534 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 ADCY8P40145 1251 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PDAP1Q13442 181 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MESDQ14696 234 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 MORC4Q8TE76 937 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 USP6NLQ92738 828 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PRPF18Q99633 342 aaKnown RBP13.78□□□□□ -0.2
NCSTN-202ENST00000368063 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
NCSTN-202ENST00000368063 ARPC4P59998 168 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 MECOMQ03112 1051 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 KCNC4Q03721 635 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 EVX2Q03828 476 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 KDSRQ06136 332 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.2
NCSTN-202ENST00000368063 GK3PQ14409 553 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.22e-6■■■■□ 24.4
NCSTN-202ENST00000368063 HSF5Q4G112 596 aaPredicted RBP13.77□□□□□ -0.2
NCSTN-202ENST00000368063 C6orf183Q5T699 404 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 SLC26A7Q8TE54 656 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.2
NCSTN-202ENST00000368063 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.2
NCSTN-202ENST00000368063 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.2
NCSTN-202ENST00000368063 LRP5O75197 1615 aa13.77□□□□□ -0.2
NCSTN-202ENST00000368063 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 CCNT2O60583 730 aaKnown RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 C6orf222P0C671 652 aaPredicted RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 OCM2P0CE71 109 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 OCMP0CE72 109 aaPredicted RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 DRAP1Q14919 205 aaPredicted RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 GRAMD1BQ3KR37 738 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 METTL21CQ5VZV1 264 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ANKS1BQ7Z6G8 1248 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 DCUN1D1Q96GG9 259 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 HGH1Q9BTY7 390 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 DRC3Q9H069 523 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 APPL1Q9UKG1 709 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 CYTH3O43739 400 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 AKAP3O75969 853 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 IL1BP01584 269 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 THRAP10827 490 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 CYP2C9P11712 490 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 MAN1A1P33908 653 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ZNF200P98182 395 aaPredicted RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 SLC7A5P1Q8MH63 180 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 POU5F2Q8N7G0 328 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
NCSTN-202ENST00000368063 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 ARMC7Q9H6L4 198 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 SLC17A7Q9P2U7 560 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
NCSTN-202ENST00000368063 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
NCSTN-202ENST00000368063 H3BNX3 289 aa13.76□□□□□ -0.21
NCSTN-202ENST00000368063 TBC1D12O60347 775 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms