RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ATAD1Q8NBU5 361 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 CAMK1GQ96NX5 476 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 FNBP1Q96RU3 617 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 LPIN3Q9BQK8 851 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 SLC46A2Q9BY10 475 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 ATXN2Q99700 1313 aaKnown RBP9.3□□□□□ -0.92
HMGB1P39-201ENST00000366304 ASXL3Q9C0F0 2248 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 NUP205Q92621 2012 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 CCNT1O60563 726 aaKnown RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 SPATA31C1P0DKV0 1188 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 CPB1P15086 417 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 GABRR2P28476 465 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 WEE1P30291 646 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 DHPSP49366 369 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 MCM2P49736 904 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 DGKEP52429 567 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 RUNX3Q13761 415 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 CENPPQ6IPU0 288 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 ZNF280DQ6N043 979 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 ARMCX6Q7L4S7 300 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 HAUS6Q7Z4H7 955 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 MARCH9Q86YJ5 346 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 PNPLA1Q8N8W4 532 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 RLN3Q8WXF3 142 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 USP13Q92995 863 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 AGXT2Q9BYV1 514 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 C22orf23Q9BZE7 217 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 CDT1Q9H211 546 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 PTPRHQ9HD43 1115 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 TUBGCP4Q9UGJ1 667 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 EVLQ9UI08 416 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 MAFFQ9ULX9 164 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
HMGB1P39-201ENST00000366304 ACACAQ13085 2346 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 UPK3BL1B0FP48 263 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 UPK3BL2E5RIL1 263 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 ABLIM1O14639 778 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 OAZ2O95190 189 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 CD59P13987 128 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 KCNE1P15382 129 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 GJA4P35212 333 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 GRM5P41594 1212 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 KARSQ15046 597 aaKnown RBP9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 MAPK6Q16659 721 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 DCAF4L1Q3SXM0 396 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 ATF7IP2Q5U623 682 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 ANO7Q6IWH7 933 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 CCNI2Q6ZMN8 369 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 NEK8Q86SG6 692 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 RASSF3Q86WH2 238 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 SKAP1Q86WV1 359 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 SFTPA1Q8IWL2 248 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 MDGA1Q8NFP4 955 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 OLIG1Q8TAK6 271 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 PSMG2Q969U7 264 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 P2RY13Q9BPV8 354 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 TASP1Q9H6P5 420 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 NUP210Q8TEM1 1887 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P39-201ENST00000366304 KIAA1549LQ6ZVL6 1849 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 TRIP11Q15643 1979 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 MTMR11A4FU01 709 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 LARGE1O95461 756 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 GCFC2P16383 781 aaKnown RBP9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 ATF6P18850 670 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 NMT1P30419 496 aaKnown RBP9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 MCM4P33991 863 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 EPHB3P54753 998 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 EVCP57679 992 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 PIK3AP1Q6ZUJ8 805 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZBTB8OSQ8IWT0 167 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 TMEFF1Q8IYR6 380 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 CMTM8Q8IZV2 173 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 STKLD1Q8NE28 680 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 KCNB2Q92953 911 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 ADPGKQ9BRR6 497 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 SLC32A1Q9H598 525 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 PLXNB3Q9ULL4 1909 aa9.27□□□□□ -0.93
HMGB1P39-201ENST00000366304 TNRC6BQ9UPQ9 1833 aaKnown RBP9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 K7EQS6 105 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 M0QZQ0 153 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 PPEF2O14830 753 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 MED24O75448 989 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 PLA2G2AP14555 144 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 ATP2B1P20020 1258 aa9.26□□□□□ -0.93
HMGB1P39-201ENST00000366304 DRD1P21728 446 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms