RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CHD9Q3L8U1 2897 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 F8VZ95 297 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 GRM6O15303 877 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 DNAJB1P25685 340 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 LMO2P25791 158 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 GLUD2P49448 558 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 NDST1P52848 882 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 ZBED6P86452 979 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 GPM6BQ13491 265 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 PDXDC1Q6P996 788 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 ANKS3Q6ZW76 656 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CRYBG2Q8N1P7 616 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 SPAG5Q96R06 1193 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 TWNKQ96RR1 684 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 GAS2L1Q99501 681 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 ELOVL4Q9GZR5 314 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CERS4Q9HA82 394 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 LUC7L2Q9Y383 392 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 A8MXQ7 604 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 H7C4K7 107 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 PCSK1P29120 753 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 CASP14P31944 242 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 SOX5P35711 763 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 STAT1P42224 750 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 ZNF132P52740 706 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 RAD23BP54727 409 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 CAMK1Q14012 370 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 KIAA1841Q6NSI8 718 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 TMEM270Q6UE05 265 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 ARNTL2Q8WYA1 636 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 RIN2Q8WYP3 895 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 NT5C1AQ9BXI3 368 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 OXCT2Q9BYC2 517 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 PRDM12Q9H4Q4 367 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 HMGXB4Q9UGU5 601 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 PRUNE2Q8WUY3 3088 aa13.23□□□□□ -0.29
NIF3L1-201ENST00000359683 TSC2P49815 1807 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 OR6C75A6NL08 312 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 FSCN2O14926 492 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 HCRTO43612 131 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 URODP06132 367 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 CLCN1P35523 988 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 ERVFC1P60507 584 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 ARID5BQ14865 1188 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 CTXN3Q4LDR2 81 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 ZNF280DQ6N043 979 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 PRSS55Q6UWB4 352 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 TMC7Q7Z402 723 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 SLC4A11Q8NBS3 891 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 NUCKS1Q9H1E3 243 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 RXFP1Q9HBX9 757 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 TLR9Q9NR96 1032 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 MTRRQ9UBK8 725 aa13.22□□□□□ -0.29
NIF3L1-201ENST00000359683 EPOPA6NHQ4 379 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 CYP26A1O43174 497 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 CXCL14O95715 111 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PAEPP09466 180 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 TPM1P09493 284 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 KRT5P13647 590 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 KRT9P35527 623 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PTPN14Q15678 1187 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PSMD5Q16401 504 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 RSPO2Q6UXX9 243 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 MRPL43Q8N983 215 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 PKMYT1Q99640 499 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms