RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CKAP4Q07065 602 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 RBBP5Q15291 538 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 FAM187BQ17R55 369 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 LONRF2Q1L5Z9 754 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CFAP221Q4G0U5 840 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 DNAJC14Q6Y2X3 702 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 MCOLN2Q8IZK6 566 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 WDTC1Q8N5D0 677 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 C12orf29Q8N999 325 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 RNF169Q8NCN4 708 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ARRDC4Q8NCT1 418 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 LPPQ93052 612 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 HPDLQ96IR7 371 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ZFP42Q96MM3 310 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 FAM118BQ9BPY3 351 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ADPGKQ9BRR6 497 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 NFKBIZQ9BYH8 718 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ELOVL4Q9GZR5 314 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CRISPLD2Q9H0B8 497 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ERVK-5Q9HDB9 667 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 DPP3Q9NY33 737 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CPSF2Q9P2I0 782 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CYTH4Q9UIA0 394 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 LHX6Q9UPM6 363 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 A0A0A6YYK5 440 aaPredicted RBP5.4□□□□□ -1.55
ATXN3-202ENST00000359366 RRN3P2A6NIE6 340 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 GOLGA8SH3BPF8 625 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 RAD51CO43502 376 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 IGHA2P01877 340 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 ASGR1P07306 291 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 ANXA13P27216 316 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 NOMO3P69849 1222 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 TUBB2AQ13885 445 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 KCNA10Q16322 511 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 DEFB115Q30KQ5 88 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF667Q5HYK9 610 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF618Q5T7W0 954 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 USP38Q8NB14 1042 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 MSANTD4Q8NCY6 345 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 UBA3Q8TBC4 463 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 IFT81Q8WYA0 676 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 KCNN1Q92952 543 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 HES6Q96HZ4 224 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 TUBB2BQ9BVA1 445 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM31Q9BZY9 425 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 FAM107BQ9H098 131 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 XPNPEP3Q9NQH7 507 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.55
ATXN3-202ENST00000359366 FAM49BQ9NUQ9 324 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 ADAM22Q9P0K1 906 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 INTUQ9ULD6 942 aa5.4□□□□□ -1.55
ATXN3-202ENST00000359366 GRIN2DO15399 1336 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SCN10AQ9Y5Y9 1956 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SMIM35A0A1B0GVV1 85 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 KRIT1O00522 736 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 DUSP11O75319 330 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 IL18RAPO95256 599 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CYP1A2P05177 515 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 NUDT7P0C024 238 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RARBP10826 455 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PYGMP11217 842 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 GZMAP12544 262 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PRLRP16471 622 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TBXAS1P24557 533 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF132P52740 706 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RABGGTBP53611 331 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RAD23BP54727 409 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SP3Q02447 781 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 GUCY2DQ02846 1103 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SOX4Q06945 474 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 IFI16Q16666 785 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ATP13A4Q4VNC1 1196 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 BEND6Q5SZJ8 279 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 MFSD14CQ5VZR4 134 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TWF2Q6IBS0 349 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 C8orf74Q6P047 294 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SLC27A1Q6PCB7 646 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 LEKR1Q6ZMV7 388 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 MON1BQ7L1V2 547 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ENOSF1Q7L5Y1 443 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 FAM228AQ86W67 206 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ZDHHC14Q8IZN3 488 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 UBR7Q8N806 425 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC26Q8TAB7 109 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 WHAMMQ8TF30 809 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RNPC3Q96LT9 517 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 HEXIM2Q96MH2 286 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 MRPL45Q9BRJ2 306 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 HERPUD2Q9BSE4 406 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 IQCGQ9H095 443 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ARFGAP3Q9NP61 516 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ZCCHC17Q9NP64 241 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SPATS2LQ9NUQ6 558 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 WDR70Q9NW82 654 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ARGLU1Q9NWB6 273 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms