RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 XDHP47989 1333 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC166P0CW27 439 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TTKP33981 857 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 GYG1P46976 350 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC117Q8IWD4 279 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CLEC4FQ8N1N0 589 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CCNYQ8ND76 341 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 OR6Y1Q8NGX8 325 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FAM118BQ9BPY3 351 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SLC9A2Q9UBY0 812 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ATP10AO60312 1499 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 OR6B2Q6IFH4 312 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ULK2Q8IYT8 1036 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 EPB41L4AQ9HCS5 686 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 STOML2Q9UJZ1 356 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TRIM43BA6NCK2 446 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ANPEPP15144 967 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 AUHQ13825 339 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SLC5A9Q2M3M2 681 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TTC39BQ5VTQ0 682 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 USP49Q70CQ1 688 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 XXYLT1Q8NBI6 393 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ATG4AQ8WYN0 398 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 AGBL1Q96MI9 1066 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 GOLGA8JA6NMD2 632 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FAM196BA6NMK8 535 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC81Q6ZN84 652 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 DDIASQ8IXT1 998 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FAM149B1Q96BN6 582 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 RIOK1Q9BRS2 568 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 INPP5FQ9Y2H2 1132 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 GRIN2DO15399 1336 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 P4HBP07237 508 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 MAP2P11137 1827 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TUBA1BP68363 451 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 MKRN4PQ13434 485 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TUBA1AQ71U36 451 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 KRT28Q7Z3Y7 464 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 KANSL2Q9H9L4 492 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF608Q9ULD9 1512 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 EME2A4GXA9 379 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PRUNE1Q86TP1 453 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FBXO11Q86XK2 927 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 DCLK3Q9C098 648 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 BFARQ9NZS9 450 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 HACD3Q9P035 362 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SLC24A2Q9UI40 661 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 DOCK11Q5JSL3 2073 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 DNM1LO00429 736 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CES2O00748 559 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TM9SF1O15321 606 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 UQCRBP14927 111 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF12P17014 697 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 WASHC5Q12768 1159 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TMTC4Q5T4D3 741 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 AKAP14Q86UN6 197 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 SCAIQ8N9R8 606 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FAM71DQ8N9W8 422 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TRPC4APQ8TEL6 797 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TEX12Q9BXU0 123 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGEF10LQ9HCE6 1279 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 GPAMQ9HCL2 828 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 NBNO60934 754 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CCNFP41002 786 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 BTDP43251 543 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 OR8H2Q8N162 312 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PPP1R36Q96LQ0 422 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 INTS13Q9NVM9 706 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 MRPL11Q9Y3B7 192 aaKnown RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CHRM1P11229 460 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TTI2Q6NXR4 508 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PADI6Q6TGC4 694 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM110Q86TL2 294 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 APOPT1Q96IL0 206 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF570Q96NI8 536 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 EPAS1Q99814 870 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 OVOS2A0A0G2JMS6 1433 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 LINC00854A0A1B0GVQ3 168 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM191CA6NGB0 347 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 F5H423 210 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PTGS2P35354 604 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 BCAR1P56945 870 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FOLH1Q04609 750 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RBBP7Q16576 425 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 EAPPQ56P03 285 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PPIL6Q8IXY8 311 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM35BQ8NCS4 154 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 APBB2Q92870 758 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 C17orf80Q9BSJ5 609 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 A0A0A6YYK5 440 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms