RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GLYCTKQ8IVS8 523 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 GPR65Q8IYL9 337 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 SPAG5Q96R06 1193 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 OXCT2Q9BYC2 517 aaPredicted RBP16.27■□□□□ 0.19
TPM1-206ENST00000358278 CEP72Q9P209 647 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 MTRRQ9UBK8 725 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 HMGXB4Q9UGU5 601 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 FBXL5Q9UKA1 691 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 PCDHGC5Q9Y5F6 944 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 ITIH6Q6UXX5 1313 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 OR6C75A6NL08 312 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 FSCN2O14926 492 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 HCRTO43612 131 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 CPB1P15086 417 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 LMO2P25791 158 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 USP8P40818 1118 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 GRIN2CQ14957 1233 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 TMEM270Q6UE05 265 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 VSTM4Q8IW00 320 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 MRPL38Q96DV4 380 aaKnown RBP16.26■□□□□ 0.19
TPM1-206ENST00000358278 MRFAP1L1Q96HT8 127 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 TNIP3Q96KP6 325 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 RTP3Q9BQQ7 232 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 SYT15Q9BQS2 421 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 ACBD6Q9BR61 282 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 NUP58Q9BVL2 599 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 EMILIN2Q9BXX0 1053 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■□□ 19.1
TPM1-206ENST00000358278 BACE2Q9Y5Z0 518 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 CDY1Q9Y6F8 540 aa16.26■□□□□ 0.19
TPM1-206ENST00000358278 C2orf71A6NGG8 1288 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 HIDE1A8MVS5 230 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 ARPP19P56211 112 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 ORC1Q13415 861 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 DRAP1Q14919 205 aaPredicted RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 OR10T2Q8NGX3 314 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 SHC3Q92529 594 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 NAA15Q9BXJ9 866 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 STK33Q9BYT3 514 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 CDH9Q9ULB4 789 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 ADCY5O95622 1261 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 ADH1AP07327 375 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 CNPP09543 421 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 ACO1P21399 889 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 NDUFV1P49821 464 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 FIGNQ5HY92 759 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 INTS6LQ5JSJ4 861 aaKnown RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 TMC6Q7Z403 805 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 ACOT1Q86TX2 421 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 UBR7Q8N806 425 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
TPM1-206ENST00000358278 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
TPM1-206ENST00000358278 F8VZ95 297 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TEX28O15482 410 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 LILRB3O75022 631 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TPM1P09493 284 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 OR4Q2P0C623 313 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 OR1D2P34982 312 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 MRE11P49959 708 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TRIM14Q14142 442 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 SLC8B1Q6J4K2 584 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 RSPO2Q6UXX9 243 aaPredicted RBP16.24■□□□□ 0.19
TPM1-206ENST00000358278 DCP1BQ8IZD4 617 aaKnown RBP16.24■□□□□ 0.19
TPM1-206ENST00000358278 B3GALNT2Q8NCR0 500 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 PPP2R3CQ969Q6 453 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TWNKQ96RR1 684 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 TMEM209Q96SK2 561 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 CLSTN3Q9BQT9 956 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 ELOVL4Q9GZR5 314 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 RXFP1Q9HBX9 757 aa16.24■□□□□ 0.19
TPM1-206ENST00000358278 FOXN3O00409 490 aaPredicted RBP16.23■□□□□ 0.19
TPM1-206ENST00000358278 ADAM12O43184 909 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 ATP2C2O75185 946 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
TPM1-206ENST00000358278 KLRC2P26717 231 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 RAD23BP54727 409 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 ROR1Q01973 937 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 SLC39A12Q504Y0 691 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 PPFIBP1Q86W92 1011 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 WHAMMQ8TF30 809 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 CPLX3Q8WVH0 158 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 TMEM176AQ96HP8 235 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 GAS2L1Q99501 681 aaPredicted RBP16.23■□□□□ 0.19
TPM1-206ENST00000358278 TTYH3Q9C0H2 523 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 GPR88Q9GZN0 384 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 ZCWPW1Q9H0M4 648 aa16.23■□□□□ 0.19
TPM1-206ENST00000358278 GYPCP04921 128 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms