RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 A8MX80 341 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 PSMD14O00487 310 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ZC3H11AO75152 810 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD3-202ENST00000358181 VPS4BO75351 444 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 CLTBP09497 229 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 PLCG1P19174 1290 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 IL2P60568 153 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 PTPN12Q05209 780 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 STX3Q13277 289 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 TMEM132DQ14C87 1099 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 RELTQ969Z4 430 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 TMEM60Q9H2L4 133 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 TASP1Q9H6P5 420 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 IMPAD1Q9NX62 359 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 UBAP1Q9NZ09 502 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ZMYND8Q9ULU4 1186 aaPredicted RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 MRPL42Q9Y6G3 142 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 AK9Q5TCS8 1911 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 POLRMTO00411 1230 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 RRM2P31350 389 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 JAK3P52333 1124 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 SPP2Q13103 211 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NNTQ13423 1086 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 LRRC14Q15048 493 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 JAMLQ86YT9 394 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 DSELQ8IZU8 1212 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 CELF1Q92879 486 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 BRIP1Q9BX63 1249 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 MAN1B1Q9UKM7 699 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 FAM135BQ49AJ0 1406 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 CFAP99D6REC4 459 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 DEAF1O75398 565 aaPredicted RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 FGGP02679 453 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 GUCY2CP25092 1073 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 STAT3P40763 770 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NUDT2P50583 147 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ABCE1P61221 599 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 STX4Q12846 297 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP10Q14694 798 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 SERAC1Q96JX3 654 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 FAM49BQ9NUQ9 324 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NAGPAQ9UK23 515 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NFU1Q9UMS0 254 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 GNG14A0A1W2PPG7 69 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 SOWAHDA6NJG2 315 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L15C9J2P7 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L13C9JLJ4 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L11C9JVI0 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L18D6R9N7 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L22D6RA61 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L17D6RBQ6 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L19D6RCP7 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L20D6RJB6 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 EEF2KO00418 725 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 SEMA3EO15041 775 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 SRP72O76094 671 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 FGFR2P21802 821 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 KDSRQ06136 332 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L24Q0WX57 530 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 USP17L6PQ6QN14 398 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 TRMT11Q7Z4G4 463 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 FAM160B2Q86V87 743 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 CENPSQ8N2Z9 138 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 WNK4Q96J92 1243 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 FAM167AQ96KS9 214 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 FMO2Q99518 471 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NHEJ1Q9H9Q4 299 aaPredicted RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 PCDHA6Q9UN73 950 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 PCDHA8Q9Y5H6 950 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 SH3BGRLO75368 114 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 GRAPQ13588 217 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 COG2Q14746 738 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 GRAPLQ8TC17 118 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 INTS13Q9NVM9 706 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SLC9A2Q9UBY0 812 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 POLD3Q15054 466 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 CYP51A1Q16850 503 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SLC30A9Q6PML9 568 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 SERHL2Q9H4I8 314 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SERHLQ9NQF3 203 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 HDAC6Q9UBN7 1215 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SMNDC1O75940 238 aaKnown RBP eCLIP10.16□□□□□ -0.783e-14■■■■■ 30
CHD3-202ENST00000358181 MFN2O95140 757 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 EIF4A3P38919 411 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 GSSP48637 474 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 POU4F1Q01851 419 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 FNDC3BQ53EP0 1204 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 FAM171BQ6P995 826 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CCDC33Q8N5R6 958 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 SETD6Q8TBK2 473 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms