RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ATL2Q8NHH9 583 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 CRYGNQ8WXF5 182 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 TOPORSQ9NS56 1045 aaPredicted RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 GTF3C4Q9UKN8 822 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 STXBP5LQ9Y2K9 1186 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 WASF2Q9Y6W5 498 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 BTAF1O14981 1849 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 NCANO14594 1321 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 GALK1P51570 392 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 R3HDM1Q15032 1099 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 C11orf63Q6NUN7 778 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 IYDQ6PHW0 289 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TMEM270Q6UE05 265 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 ETNK2Q9NVF9 386 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 DDX60LQ5H9U9 1706 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 A6NHS1 94 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 A6NJR5 290 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 PDE5AO76074 875 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 RALAP11233 206 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 KRT4P19013 534 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CHKAP35790 457 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 PPATQ06203 517 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 ACAP1Q15027 740 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 SMAD1Q15797 465 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 CCDC92Q53HC0 331 aaPredicted RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 TTC27Q6P3X3 843 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CYFIP1Q7L576 1253 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CPNE8Q86YQ8 564 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TAS1R2Q8TE23 839 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 EPS8L1Q8TE68 723 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CAMKK2Q96RR4 588 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TRAIPQ9BWF2 469 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TSSK1BQ9BXA7 367 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CHST7Q9NS84 486 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 ZHX2Q9Y6X8 837 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 ATP8B3O60423 1300 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CASQ2O14958 399 aaPredicted RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 CFLARO15519 480 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TTC4O95801 387 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 CD19P15391 556 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 DAB2IPQ5VWQ8 1189 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 STYK1Q6J9G0 422 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 ICA1LQ8NDH6 482 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 TUBB6Q9BUF5 446 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 Q9H521 79 aa10.49□□□□□ -0.73
RNF40-202ENST00000357890 ZNF70Q9UC06 446 aaPredicted RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 SCAF8Q9UPN6 1271 aaKnown RBP10.49□□□□□ -0.73
RNF40-202ENST00000357890 LRRIQ4A6NIV6 560 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 E7ENQ6 273 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 NCF2P19878 526 aaPredicted RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 ADARP55265 1226 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 BPIFB4P59827 614 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 PDIA2Q13087 525 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 FAM84AQ96KN4 292 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 FBXO6Q9NRD1 293 aaPredicted RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 ANKRD63C9JTQ0 380 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 TLR3O15455 904 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 TOM1L1O75674 476 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 KRT1P04264 644 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 INHBAP08476 426 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 GZMAP12544 262 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 MX2P20592 715 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 RRM1P23921 792 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 CA8P35219 290 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 PSMC5P62195 406 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 NOP14P78316 857 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 GPS1Q13098 491 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 STAT4Q14765 748 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 PYROXD1Q8WU10 500 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 RAVER2Q9HCJ3 691 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 MRPL47Q9HD33 250 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 CHKBQ9Y259 395 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 C2orf71A6NGG8 1288 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 MAGEA4P43358 317 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 JAK3P52333 1124 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 INHBEP58166 350 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 CNPY1Q3B7I2 92 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 TBC1D25Q3MII6 688 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 ZC3H12AQ5D1E8 599 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 ARMCX6Q7L4S7 300 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 GALNT4Q8N4A0 578 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 WDR60Q8WVS4 1066 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 TIPINQ9BVW5 301 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms