RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ANKS1BQ7Z6G8 1248 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 ARHGEF2Q92974 986 aaKnown RBP23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 NLRP4Q96MN2 994 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 NINJ2Q9NZG7 142 aa23.52■■□□□ 1.36
NKX2-1-201ENST00000354822 F8VP50 259 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 TTLL4Q14679 1199 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ATP13A4Q4VNC1 1196 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 MFSD7Q6UXD7 560 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 PACS2Q86VP3 889 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ZCCHC9Q8N567 271 aaKnown RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 TFAP2BQ92481 460 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ACTR5Q9H9F9 607 aaPredicted RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 PRMT7Q9NVM4 692 aaPredicted RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ZNF148Q9UQR1 794 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 TXNP10599 105 aaKnown RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ATF7P17544 494 aaPredicted RBP23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 MOGSQ13724 837 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 STAT4Q14765 748 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 CNGA2Q16280 664 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 KAZNQ674X7 775 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 ANKS4BQ8N8V4 417 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 TXNRD2Q9NNW7 524 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 EFR3BQ9Y2G0 817 aa23.51■■□□□ 1.35
NKX2-1-201ENST00000354822 KRT10P13645 584 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 MBTD1Q05BQ5 628 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 Q3C1V9 767 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 ZNF667Q5HYK9 610 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 OPTNQ96CV9 577 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 WDR35Q9P2L0 1181 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 SIGLEC16A6NMB1 481 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 PI4K2BG5E9Z4 385 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 OGDHQ02218 1023 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 TNFAIP2Q03169 654 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 P3H1Q32P28 736 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 ZNF484Q5JVG2 852 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 FBXO16Q8IX29 292 aaPredicted RBP23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 ALLCQ8N6M5 410 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 CCDC197Q8NCU1 140 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 FNIP1Q8TF40 1166 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 PRMT1Q99873 361 aaKnown RBP23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 FAM118BQ9BPY3 351 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 BCO2Q9BYV7 579 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 NSRP1Q9H0G5 558 aaKnown RBP23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 R3HDMLQ9H3Y0 253 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 ERAP1Q9NZ08 941 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 DNPEPQ9ULA0 475 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 CAPN7Q9Y6W3 813 aa23.5■■□□□ 1.35
NKX2-1-201ENST00000354822 hCG_1818297A0A087WSY0 165 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 GOLGA6L7A0A1B0GV03 622 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 ASB14A6NK59 587 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 DNALI1O14645 258 aaPredicted RBP23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 ABHD2P08910 425 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 ACTN3Q08043 901 aaPredicted RBP23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 FAM187BQ17R55 369 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 SCARA5Q6ZMJ2 495 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 FRMD8P1Q9BZ68 369 aaPredicted RBP23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 CDT1Q9H211 546 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 NXF1Q9UBU9 619 aaKnown RBP23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 LGALS13Q9UHV8 139 aa23.49■■□□□ 1.35
NKX2-1-201ENST00000354822 H0YHG0 523 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 CDH16O75309 829 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 OSTNP61366 133 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 EEF1DP3Q658K8 133 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 PIGWQ7Z7B1 504 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 NKD2Q969F2 451 aaPredicted RBP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 KLHL11Q9NVR0 708 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 B4GALT5O43286 388 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 KRT7P08729 469 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 KRT3P12035 628 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 CD19P15391 556 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 TCF4P15884 667 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 CDKN2BP42772 138 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 PHKA2P46019 1235 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 GSCP56915 257 aaPredicted RBP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 HADHQ16836 314 aaKnown RBP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 DENND1BQ6P3S1 775 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 RIBC1Q8N443 379 aaPredicted RBP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 TRAPPC12Q8WVT3 735 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 CFAP57Q96MR6 1250 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 TTC25Q96NG3 672 aa23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 RBM15Q96T37 977 aaKnown RBP eCLIP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 TPX2Q9ULW0 747 aaKnown RBP23.48■■□□□ 1.35
NKX2-1-201ENST00000354822 ITGAVP06756 1048 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 KRT19P08727 400 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 ATICP31939 592 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 MAGEA4P43358 317 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 VCPP55072 806 aaKnown RBP23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 ITIH4Q14624 930 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 KYAT1Q16773 422 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 KDM4CQ9H3R0 1056 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 DNAJC17Q9NVM6 304 aaKnown RBP23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 SAMD15Q9P1V8 674 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 ACTL7BQ9Y614 415 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 MCF2P10911 925 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 PSMA2P25787 234 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 CLCN3P51790 818 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 MORF4L2Q15014 288 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 WDR72Q3MJ13 1102 aa23.47■■□□□ 1.35
NKX2-1-201ENST00000354822 CCDC38Q502W7 563 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms