RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 CLCA1A8K7I4 914 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 M0QYT0 321 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 AKAP3O75969 853 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADH1CP00326 375 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IFNA14P01570 189 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 KRT18P05783 430 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PLCG2P16885 1265 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 AMD1P17707 334 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 GBP2P32456 591 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PBX2P40425 430 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TMPOP42166 694 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CTSKP43235 329 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PLA2G4AP47712 749 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DGKQP52824 942 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ARL4CP56559 192 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 BDH1Q02338 343 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CHAF1AQ13111 956 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 RSPO4Q2I0M5 234 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPRED3Q2MJR0 410 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZBTB41Q5SVQ8 909 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IZUMO3Q5VZ72 239 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 RTN4RL1Q86UN2 441 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADGRG2Q8IZP9 1017 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 AVL9Q8NBF6 648 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SH3RF3Q8TEJ3 882 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRIM44Q96DX7 344 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 HIC2Q96JB3 615 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 VCPIP1Q96JH7 1222 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FAM227BQ96M60 508 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 AGAP3Q96P47 875 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TGS1Q96RS0 853 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CD244Q9BZW8 370 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SMG9Q9H0W8 520 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FBRSQ9HAH7 460 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TMEM9BQ9NQ34 198 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCM2LQ9NUG4 571 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZSCAN32Q9NX65 697 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CNOT8Q9UFF9 292 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZMYND8Q9ULU4 1186 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SIK3Q9Y2K2 1263 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 MTO1Q9Y2Z2 717 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DUSP10Q9Y6W6 482 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 KIAA0232Q92628 1395 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NKTRP30414 1462 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DNMT1P26358 1616 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TYW5A2RUC4 315 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 C17orf100A8MU93 164 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SYT5O00445 386 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 BIN1O00499 593 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 VWA5AO00534 786 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 H2AFYO75367 372 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPAG6O75602 509 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 STAM2O75886 525 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SIX3O95343 332 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADH1BP00325 375 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NME2P22392 152 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TPP2P29144 1249 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 RRP1P56182 461 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CDC42EP1Q00587 391 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CAP1Q01518 475 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 MAP4K2Q12851 820 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 HDAC1Q13547 482 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANO6Q4KMQ2 910 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SEZ6Q53EL9 994 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FBXO47Q5MNV8 452 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 VPS53Q5VIR6 699 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NUTM2GQ5VZR2 741 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TMEM211Q6ICI0 200 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SNRNP48Q6IEG0 339 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 TTC9BQ8N6N2 239 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NLRP3Q96P20 1036 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 MIPEPQ99797 713 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CDADC1Q9BWV3 514 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SERHL2Q9H4I8 314 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CXorf56Q9H5V9 222 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FBXO40Q9UH90 709 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PCDHB1Q9Y5F3 818 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC12A7Q9Y666 1083 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NUP155O75694 1391 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DENND3A2RUS2 1198 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 BTBD17A6NE02 478 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PES1O00541 588 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 GRM6O15303 877 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 CTAG2O75638 210 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 KIF20AO95235 890 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IMPDH2P12268 514 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 P4HA1P13674 534 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC6A4P31645 630 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 IGHMBP2P38935 993 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 DCCP43146 1447 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 NESP48681 1621 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 GRSF1Q12849 480 aaKnown RBP eCLIP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 OVGP1Q12889 678 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 AUHQ13825 339 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 STARD3Q14849 445 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PUM3Q15397 648 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 PTPN21Q16825 1174 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 LRRC24Q50LG9 513 aa2.38□□□□□ -2.03
SMARCAD1-201ENST00000354268 FAM133BQ5BKY9 247 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms