RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 HIF1AQ16665 826 aa12.48□□□□□ -0.41
APP-201ENST00000346798 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
APP-201ENST00000346798 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
APP-201ENST00000346798 PLEKHA7Q6IQ23 1121 aa12.48□□□□□ -0.41
APP-201ENST00000346798 GPAT2Q6NUI2 795 aa12.48□□□□□ -0.41
APP-201ENST00000346798 C3orf62Q6ZUJ4 267 aa12.48□□□□□ -0.41
APP-201ENST00000346798 RFX8Q6ZV50 586 aa12.48□□□□□ -0.41
APP-201ENST00000346798 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
APP-201ENST00000346798 ZNF677Q86XU0 584 aa12.48□□□□□ -0.41
APP-201ENST00000346798 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
APP-201ENST00000346798 EMC1Q8N766 993 aa12.48□□□□□ -0.41
APP-201ENST00000346798 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
APP-201ENST00000346798 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
APP-201ENST00000346798 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
APP-201ENST00000346798 ZFP69BQ9UJL9 534 aa12.48□□□□□ -0.41
APP-201ENST00000346798 DOCK5Q9H7D0 1870 aa12.48□□□□□ -0.41
APP-201ENST00000346798 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
APP-201ENST00000346798 PIK3R2O00459 728 aa12.48□□□□□ -0.41
APP-201ENST00000346798 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
APP-201ENST00000346798 PLA2G6O60733 806 aa12.48□□□□□ -0.41
APP-201ENST00000346798 TCEA3O75764 348 aa12.48□□□□□ -0.41
APP-201ENST00000346798 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
APP-201ENST00000346798 CRYMQ14894 314 aa12.48□□□□□ -0.41
APP-201ENST00000346798 PSMD6Q15008 389 aa12.48□□□□□ -0.41
APP-201ENST00000346798 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
APP-201ENST00000346798 ALLCQ8N6M5 410 aa12.48□□□□□ -0.41
APP-201ENST00000346798 RBM41Q96IZ5 413 aaKnown RBP12.48□□□□□ -0.41
APP-201ENST00000346798 NTPCRQ9BSD7 190 aaKnown RBP12.48□□□□□ -0.41
APP-201ENST00000346798 MTMR12Q9C0I1 747 aa12.48□□□□□ -0.41
APP-201ENST00000346798 EDN1P05305 212 aa12.47□□□□□ -0.41
APP-201ENST00000346798 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
APP-201ENST00000346798 LMNB2Q03252 620 aa12.47□□□□□ -0.41
APP-201ENST00000346798 MAPK6Q16659 721 aa12.47□□□□□ -0.41
APP-201ENST00000346798 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
APP-201ENST00000346798 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
APP-201ENST00000346798 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
APP-201ENST00000346798 LRRN4Q8WUT4 740 aa12.47□□□□□ -0.41
APP-201ENST00000346798 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
APP-201ENST00000346798 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
APP-201ENST00000346798 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
APP-201ENST00000346798 CST8O60676 142 aa12.47□□□□□ -0.41
APP-201ENST00000346798 ZC3H11AO75152 810 aaKnown RBP eCLIP12.47□□□□□ -0.41
APP-201ENST00000346798 RGS20O76081 388 aa12.47□□□□□ -0.41
APP-201ENST00000346798 MAP3K6O95382 1288 aa12.47□□□□□ -0.41
APP-201ENST00000346798 ALADP13716 330 aa12.47□□□□□ -0.41
APP-201ENST00000346798 GM2AP17900 193 aa12.47□□□□□ -0.41
APP-201ENST00000346798 GLRA2P23416 452 aa12.47□□□□□ -0.41
APP-201ENST00000346798 PCK1P35558 622 aa12.47□□□□□ -0.41
APP-201ENST00000346798 MYL6P60660 151 aa12.47□□□□□ -0.41
APP-201ENST00000346798 OTUD4Q01804 1114 aaKnown RBP12.47□□□□□ -0.41
APP-201ENST00000346798 ZBTB16Q05516 673 aa12.47□□□□□ -0.41
APP-201ENST00000346798 FNBP1LQ5T0N5 605 aa12.47□□□□□ -0.41
APP-201ENST00000346798 NLRP9Q7RTR0 991 aa12.47□□□□□ -0.41
APP-201ENST00000346798 VSIG10LQ86VR7 867 aa12.47□□□□□ -0.41
APP-201ENST00000346798 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
APP-201ENST00000346798 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
APP-201ENST00000346798 ZNF75CPQ92670 426 aaPredicted RBP12.47□□□□□ -0.41
APP-201ENST00000346798 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
APP-201ENST00000346798 ARHGAP28Q9P2N2 729 aa12.47□□□□□ -0.41
APP-201ENST00000346798 CHMP2BQ9UQN3 213 aa12.47□□□□□ -0.41
APP-201ENST00000346798 TCRBV7S3A2A0A539 114 aa12.47□□□□□ -0.41
APP-201ENST00000346798 EDF1O60869 148 aaKnown RBP12.47□□□□□ -0.41
APP-201ENST00000346798 CD48P09326 243 aa12.47□□□□□ -0.41
APP-201ENST00000346798 CCNB1P14635 433 aa12.47□□□□□ -0.41
APP-201ENST00000346798 PSMA2P25787 234 aa12.47□□□□□ -0.41
APP-201ENST00000346798 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
APP-201ENST00000346798 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
APP-201ENST00000346798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.47□□□□□ -0.41
APP-201ENST00000346798 EEPD1Q7L9B9 569 aa12.47□□□□□ -0.41
APP-201ENST00000346798 RFWD2Q8NHY2 731 aa12.47□□□□□ -0.41
APP-201ENST00000346798 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
APP-201ENST00000346798 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
APP-201ENST00000346798 SYNCQ9H7C4 482 aa12.47□□□□□ -0.41
APP-201ENST00000346798 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
APP-201ENST00000346798 STARD13Q9Y3M8 1113 aa12.47□□□□□ -0.41
APP-201ENST00000346798 TMEM191CA6NGB0 347 aa12.46□□□□□ -0.41
APP-201ENST00000346798 VWA5AO00534 786 aa12.46□□□□□ -0.41
APP-201ENST00000346798 KRT19P08727 400 aa12.46□□□□□ -0.41
APP-201ENST00000346798 TMEM191BP0C7N4 346 aa12.46□□□□□ -0.41
APP-201ENST00000346798 SRGAP2CP0DJJ0 459 aa12.46□□□□□ -0.41
APP-201ENST00000346798 GCKP35557 465 aa12.46□□□□□ -0.41
APP-201ENST00000346798 GPX6P59796 221 aa12.46□□□□□ -0.41
APP-201ENST00000346798 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
APP-201ENST00000346798 PDK4Q16654 411 aa12.46□□□□□ -0.41
APP-201ENST00000346798 LRRC6Q86X45 466 aa12.46□□□□□ -0.41
APP-201ENST00000346798 FAM71DQ8N9W8 422 aa12.46□□□□□ -0.41
APP-201ENST00000346798 FBXO36Q8NEA4 188 aa12.46□□□□□ -0.41
APP-201ENST00000346798 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.41
APP-201ENST00000346798 HSPH1Q92598 858 aa12.46□□□□□ -0.41
APP-201ENST00000346798 TTC17Q96AE7 1141 aa12.46□□□□□ -0.41
APP-201ENST00000346798 CALN1Q9BXU9 219 aa12.46□□□□□ -0.41
APP-201ENST00000346798 KCNA2P16389 499 aa12.46□□□□□ -0.41
APP-201ENST00000346798 MMP8P22894 467 aa12.46□□□□□ -0.41
APP-201ENST00000346798 PLEKHG4Q58EX7 1191 aa12.46□□□□□ -0.41
APP-201ENST00000346798 TFDP3Q5H9I0 405 aa12.46□□□□□ -0.41
APP-201ENST00000346798 RNASEH2BQ5TBB1 312 aaKnown RBP12.46□□□□□ -0.41
APP-201ENST00000346798 FYB2Q5VWT5 728 aa12.46□□□□□ -0.41
APP-201ENST00000346798 ZC3H18Q86VM9 953 aaKnown RBP12.46□□□□□ -0.41
APP-201ENST00000346798 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
APP-201ENST00000346798 TMEM174Q8WUU8 243 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms