RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TRIM72Q6ZMU5 477 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
SNED1-202ENST00000342631 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 GPR65Q8IYL9 337 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 ZNF606Q8WXB4 792 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
SNED1-202ENST00000342631 TWNKQ96RR1 684 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 PLVAPQ9BX97 442 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 HMGXB4Q9UGU5 601 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 PCDHA11Q9Y5I1 949 aa17.4■□□□□ 0.38
SNED1-202ENST00000342631 EPN1Q9Y6I3 576 aaPredicted RBP17.4■□□□□ 0.38
SNED1-202ENST00000342631 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 THAP12O43422 761 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 CAPN15O75808 1086 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 IPO7O95373 1038 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 PLEKP08567 350 aaPredicted RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 LINC00271P0C7V0 271 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 TNFAIP3P21580 790 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 PBX3P40426 434 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 KRT17Q04695 432 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 SLC18A3Q16572 532 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 PPP1R2P3Q6NXS1 205 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 TMEM173Q86WV6 379 aaPredicted RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 ZNF830Q96NB3 372 aaPredicted RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 TTPALQ9BTX7 342 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 TIMM13Q9Y5L4 95 aaPredicted RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 EIF3CLB5ME19 914 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 H7C4K7 107 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 CD19P15391 556 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 LMO2P25791 158 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 TKTP29401 623 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 KIF11P52732 1056 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 MRPL58Q14197 206 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 CNGA2Q16280 664 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 ARHGAP17Q68EM7 881 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 ANKS3Q6ZW76 656 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 B3GALNT2Q8NCR0 500 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 BCL7CQ8WUZ0 217 aaPredicted RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 SAMD11Q96NU1 681 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 EIF3CQ99613 913 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 ADAMTS1Q9UHI8 967 aa17.39■□□□□ 0.37
SNED1-202ENST00000342631 PUF60Q9UHX1 559 aaKnown RBP17.39■□□□□ 0.37
SNED1-202ENST00000342631 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNED1-202ENST00000342631 CEP290O15078 2479 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
SNED1-202ENST00000342631 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
SNED1-202ENST00000342631 NDUFA10O95299 355 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 LCA5LO95447 670 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 SOD2P04179 222 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 BMPR1AP36894 532 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
SNED1-202ENST00000342631 VARS2Q5ST30 1063 aaKnown RBP17.38■□□□□ 0.37
SNED1-202ENST00000342631 C10orf76Q5T2E6 689 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 ZNF280DQ6N043 979 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 ACOT1Q86TX2 421 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 SLC30A5Q8TAD4 765 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 SYT15Q9BQS2 421 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNED1-202ENST00000342631 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 LUC7LQ9NQ29 371 aaKnown RBP17.38■□□□□ 0.37
SNED1-202ENST00000342631 CHST7Q9NS84 486 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 NME7Q9Y5B8 376 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 VWA8A3KMH1 1905 aa17.38■□□□□ 0.37
SNED1-202ENST00000342631 OR6C75A6NL08 312 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 GZMAP12544 262 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 CHRNB2P17787 502 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 PTPN1P18031 435 aaKnown RBP17.37■□□□□ 0.37
SNED1-202ENST00000342631 KRT83P78385 493 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 TSPY1Q01534 308 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 FMO1Q01740 532 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 SPA17Q15506 151 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 RAD9BQ6WBX8 426 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 SLC20A1Q8WUM9 679 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 HERC2P3Q9BVR0 1158 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 ZNF518BQ9C0D4 1074 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 LHX5Q9H2C1 402 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 PDCL3Q9H2J4 239 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 LINC01553A4QN01 128 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 LSM8O95777 96 aaKnown RBP17.37■□□□□ 0.37
SNED1-202ENST00000342631 RB1P06400 928 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 MMEP08473 750 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
SNED1-202ENST00000342631 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
SNED1-202ENST00000342631 LCLAT1Q6UWP7 414 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 CEP57Q86XR8 500 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 GPIHBP1Q8IV16 184 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 GLYCTKQ8IVS8 523 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 PIK3R5Q8WYR1 880 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 TFAP2BQ92481 460 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 RTP3Q9BQQ7 232 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNED1-202ENST00000342631 SSX2IPQ9Y2D8 614 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 CEP83Q9Y592 693 aa17.37■□□□□ 0.37
SNED1-202ENST00000342631 NLRC5Q86WI3 1866 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 A0A087X0T9 212 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms