RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PPP1R15BQ5SWA1 713 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 DENND1BQ6P3S1 775 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 DNAJC24Q6P3W2 148 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 RAET1EQ8TD07 263 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 MAIP1Q8WWC4 291 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 BTBD6Q96KE9 485 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 TWNKQ96RR1 684 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 VIPAS39Q9H9C1 493 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 SLC38A7Q9NVC3 462 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 TUBGCP4Q9UGJ1 667 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 A0A0U1RQG5 324 aaPredicted RBP17.22■□□□□ 0.35
HPS1-202ENST00000338546 O00370 1275 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 TRPA1O75762 1119 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 SEC31AO94979 1220 aaKnown RBP17.22■□□□□ 0.35
HPS1-202ENST00000338546 CHRNA1P02708 482 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 AKAP5P24588 427 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 NDST1P52848 882 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 PIGHQ14442 188 aaPredicted RBP17.22■□□□□ 0.35
HPS1-202ENST00000338546 PTGISQ16647 500 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 FBXO47Q5MNV8 452 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 EMBQ6PCB8 327 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 LIMS2Q7Z4I7 341 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 RHOT1Q8IXI2 618 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 NIPA2Q8N8Q9 360 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 CD99L2Q8TCZ2 262 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 FNIP1Q8TF40 1166 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 C18orf8Q96DM3 657 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 MTUS1Q9ULD2 1270 aa17.22■□□□□ 0.35
HPS1-202ENST00000338546 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 SIGLEC16A6NMB1 481 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 MICAL2O94851 1124 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 HEXIM1O94992 359 aaKnown RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 SETSIPP0DME0 302 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 TAF6P49848 677 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 RAB27AP51159 221 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 SV2CQ496J9 727 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 MRPL10Q7Z7H8 261 aaKnown RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 SLC13A5Q86YT5 568 aaPredicted RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 SLAIN1Q8ND83 568 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 AENQ8WTP8 325 aaKnown RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
HPS1-202ENST00000338546 APOL6Q9BWW8 343 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 SEZ6LQ9BYH1 1024 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 FAM105AQ9NUU6 356 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 GRIN2DO15399 1336 aa17.21■□□□□ 0.35
HPS1-202ENST00000338546 FAM170AA1A519 330 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 RAD51CO43502 376 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 ZNF623O75123 536 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 PYGMP11217 842 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 CHRNA3P32297 505 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 SCN1AP35498 2009 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 GPD2P43304 727 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 MARCKSL1P49006 195 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 EPHB4P54760 987 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 SNX16P57768 344 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 NNTQ13423 1086 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 CUL1Q13616 776 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 ITGA7Q13683 1181 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 DHX34Q14147 1143 aaKnown RBP17.2■□□□□ 0.34
HPS1-202ENST00000338546 DCUN1D2Q6PH85 259 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 KLHL7Q8IXQ5 586 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 KATNAL2Q8IYT4 538 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 CXCL16Q9H2A7 254 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 HMGXB4Q9UGU5 601 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 GIT1Q9Y2X7 761 aa17.2■□□□□ 0.34
HPS1-202ENST00000338546 FAM187AA6NFU0 413 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 KPNA7A9QM74 516 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 FSCN2O14926 492 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 GLI1P08151 1106 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 SKIP12755 728 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 ITGA4P13612 1032 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 SSTR3P32745 418 aaPredicted RBP17.19■□□□□ 0.34
HPS1-202ENST00000338546 ACLYP53396 1101 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 SLC7A5Q01650 507 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 PAK2Q13177 524 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
HPS1-202ENST00000338546 ACAP1Q15027 740 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 CYP1B1Q16678 543 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 PTPN20Q4JDL3 420 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 ARHGAP17Q68EM7 881 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
HPS1-202ENST00000338546 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 CRYBG2Q8N1P7 616 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 TOP6BLQ8N6T0 577 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 SEC14L1Q92503 715 aa17.19■□□□□ 0.34
HPS1-202ENST00000338546 DDX27Q96GQ7 796 aaKnown RBP17.19■□□□□ 0.34
HPS1-202ENST00000338546 PPP1R10Q96QC0 940 aaKnown RBP17.19■□□□□ 0.34
HPS1-202ENST00000338546 SAGE1Q9NXZ1 904 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms