RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CDY1Q9Y6F8 540 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 CACNB2Q08289 660 aaPredicted RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 FAXCQ5TGI0 409 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 TEX9Q8N6V9 391 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 PRMT7Q9NVM4 692 aaPredicted RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 FER1L4A9Z1Z3 1794 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 TMEM247A6NEH6 219 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 ZBTB7AO95365 584 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 ATXN3P54252 364 aaPredicted RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 SEZ6Q53EL9 994 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 TAS2R42Q7RTR8 314 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 TAS1R2Q8TE23 839 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 C20orf96Q9NUD7 363 aaPredicted RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 LMCD1Q9NZU5 365 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 HAO1Q9UJM8 370 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 SCAF8Q9UPN6 1271 aaKnown RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 MYL2P10916 166 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 MUTP22033 750 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 PTENP60484 403 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 SLC20A1Q8WUM9 679 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 ASIC4Q96FT7 647 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 EEF2KO00418 725 aaKnown RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 NPTX2P47972 431 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 PSMC6P62333 389 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 INPP5AQ14642 412 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 ARHGEF6Q15052 776 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 ZNF669Q96BR6 464 aaPredicted RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 THAP11Q96EK4 314 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 HPDLQ96IR7 371 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 FASTKD5Q7L8L6 764 aaKnown RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 NOP9Q86U38 636 aaKnown RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 RTFDC1Q9BY42 306 aaPredicted RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 AKAP10O43572 662 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 TCN1P20061 433 aaPredicted RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 VHLP40337 213 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 C6orf10Q5SRN2 563 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 MAGEB18Q96M61 343 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
RTN4-202ENST00000337526 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 POLIQ9UNA4 740 aa14.35□□□□□ -0.11
RTN4-202ENST00000337526 TFDP3Q5H9I0 405 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 KIRREL3Q8IZU9 778 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 GPRASP2Q96D09 838 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 CCDC134Q9H6E4 229 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ARHGEF38Q9NXL2 777 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
RTN4-202ENST00000337526 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 PSMD3O43242 534 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ICAM1P05362 532 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ABCE1P61221 599 aaKnown RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 CDC42EP1Q00587 391 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 C16orf89Q6UX73 402 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 PRUNE1Q86TP1 453 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 CREG2Q8IUH2 290 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 GCNAQ96QF7 691 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 SCHIP1Q9P0W5 487 aaPredicted RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 IFNA8P32881 189 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 PTGER2P43116 358 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 MEA1Q16626 185 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 RNF219Q5W0B1 726 aaPredicted RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 SV2AQ7L0J3 742 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 SLC47A2Q86VL8 602 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 GALNT4Q8N4A0 578 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 FBXO36Q8NEA4 188 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 PABPC5Q96DU9 382 aaKnown RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 PNMA5Q96PV4 448 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 TRIM54Q9BYV2 358 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 SHCBP1LQ9BZQ2 653 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 TJP2Q9UDY2 1190 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 TLR2O60603 784 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ZC3H11AO75152 810 aaKnown RBP eCLIP14.34□□□□□ -0.111e-32■■■■□ 22.5
RTN4-202ENST00000337526 UBOX5O94941 541 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
RTN4-202ENST00000337526 FAM153BP0C7A2 387 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 FAM153CQ494X1 144 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 DAB2IPQ5VWQ8 1189 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 ATPAF2Q8N5M1 289 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 PCYOX1LQ8NBM8 494 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms