RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ASTN2O75129 1339 aaPredicted RBP14.46□□□□□ -0.09
SYNE3-201ENST00000334258 IGLV3-22A0A075B6J6 115 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 SLC16A4O15374 487 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 FDX1P10109 184 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
SYNE3-201ENST00000334258 LMNB2Q03252 620 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 DLK2Q6UY11 383 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 HAUS6Q7Z4H7 955 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 MCOLN2Q8IZK6 566 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 TCP10LQ8TDR4 215 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 ZFAND2BQ8WV99 257 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 GORASP1Q9BQQ3 440 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 TUBB6Q9BUF5 446 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 UNC45AQ9H3U1 944 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 DNPEPQ9ULA0 475 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 WASF2Q9Y6W5 498 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 KIF13BQ9NQT8 1826 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 C2orf71A6NGG8 1288 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 NDUFB10O96000 172 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 ADRB2P07550 413 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 MYBPC2Q14324 1141 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 STYK1Q6J9G0 422 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 KCTD17Q8N5Z5 321 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 CFAP61Q8NHU2 1237 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 FAM84AQ96KN4 292 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 CYTH2Q99418 400 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 FOXP3Q9BZS1 431 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 ARMCX1Q9P291 453 aa14.46□□□□□ -0.1
SYNE3-201ENST00000334258 MROH7Q68CQ1 1323 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 RNF8O76064 485 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 PEX3P56589 373 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TAS2R40P59535 323 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 OGFOD1Q8N543 542 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 FAM81BQ96LP2 452 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TTC1Q99614 292 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 ZNF184Q99676 751 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TLE6Q9H808 572 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TAS2R1Q9NYW7 299 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-201ENST00000334258 SGK1O00141 431 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-201ENST00000334258 ARP10275 920 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 MAGEA8P43361 318 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 PRKG1Q13976 671 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 SNRNP35Q16560 246 aaKnown RBP14.45□□□□□ -0.1
SYNE3-201ENST00000334258 ATP13A4Q4VNC1 1196 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 ARHGAP24Q8N264 748 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 FBXL13Q8NEE6 735 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 PYROXD1Q8WU10 500 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TTC17Q96AE7 1141 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 PRR11Q96HE9 360 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TRAPPC9Q96Q05 1148 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 KCND2Q9NZV8 630 aa14.45□□□□□ -0.1
SYNE3-201ENST00000334258 TYROBPO43914 113 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 PROSCO94903 275 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 GSTT1P30711 240 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 SSTR1P30872 391 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 PPP2R5CQ13362 524 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 EFTUD2Q15029 972 aaKnown RBP eCLIP14.44□□□□□ -0.15e-7■■■■□ 24.2
SYNE3-201ENST00000334258 LIN9Q5TKA1 542 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 HHIPL2Q6UWX4 724 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 RINLQ6ZS11 566 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 RELL1Q8IUW5 271 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 HELQQ8TDG4 1101 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TEKT3Q9BXF9 490 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TMEM120AQ9BXJ8 343 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 WDR11Q9BZH6 1224 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 RAB20Q9NX57 234 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 GEMIN4P57678 1058 aaKnown RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 AP1B1Q10567 949 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 CTC1Q2NKJ3 1217 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 LRRC23Q53EV4 343 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 MDH1BQ5I0G3 518 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 C6orf163Q5TEZ5 329 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 FOXB2Q5VYV0 432 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 SAMD7Q7Z3H4 446 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 ANKS1BQ7Z6G8 1248 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TDRPQ86YL5 185 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 PLEKHG4BQ96PX9 1271 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 GLIS2Q9BZE0 524 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 SIGLEC16A6NMB1 481 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 B2RBV5 119 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 MAFGO15525 162 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 ZSCAN9O15535 394 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 KLRC2P26717 231 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TMEM62Q0P6H9 643 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 KLF1Q13351 362 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TFDP1Q14186 410 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 CEP55Q53EZ4 464 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 ARHGAP22Q7Z5H3 698 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 TTC7BQ86TV6 843 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 ACER1Q8TDN7 264 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 PDP2Q9P2J9 529 aa14.44□□□□□ -0.1
SYNE3-201ENST00000334258 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms