RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SENP8Q96LD8 212 aa24.74■■□□□ 1.55
TSEN54-201ENST00000333213 DPEP3Q9H4B8 488 aa24.74■■□□□ 1.55
TSEN54-201ENST00000333213 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.74■■□□□ 1.55
TSEN54-201ENST00000333213 TMEM253P0C7T8 217 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 NAA35Q5VZE5 725 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 CNKSR3Q6P9H4 555 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 OSTM1Q86WC4 334 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 COLGALT2Q8IYK4 626 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 TTC39CQ8N584 583 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 TOP6BLQ8N6T0 577 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 HASPINQ8TF76 798 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 LPIN3Q9BQK8 851 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 DNAJB4Q9UDY4 337 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 PCDHGC3Q9UN70 934 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 BTNL10A8MVZ5 291 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 I3L4J1 428 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 HUS1O60921 280 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 RFC2P35250 354 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 CENPCQ03188 943 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 WSCD1Q658N2 575 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 DPH6Q7L8W6 267 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 ACOT1Q86TX2 421 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 ADGRF2Q8IZF7 708 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 DDX27Q96GQ7 796 aaKnown RBP24.73■■□□□ 1.55
TSEN54-201ENST00000333213 HEXIM2Q96MH2 286 aaKnown RBP24.73■■□□□ 1.55
TSEN54-201ENST00000333213 HCSTQ9UBK5 93 aa24.73■■□□□ 1.55
TSEN54-201ENST00000333213 CHORDC1Q9UHD1 332 aaPredicted RBP24.73■■□□□ 1.55
TSEN54-201ENST00000333213 C2CD6Q53TS8 623 aa24.72■■□□□ 1.55
TSEN54-201ENST00000333213 TXLNBQ8N3L3 684 aa24.72■■□□□ 1.55
TSEN54-201ENST00000333213 URGCPQ8TCY9 931 aa24.72■■□□□ 1.55
TSEN54-201ENST00000333213 MYO1AQ9UBC5 1043 aa24.72■■□□□ 1.55
TSEN54-201ENST00000333213 STXBP5LQ9Y2K9 1186 aa24.72■■□□□ 1.55
TSEN54-201ENST00000333213 KIF4AO95239 1232 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 PDGFRBP09619 1106 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 RAG1P15918 1043 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 GNL1P36915 607 aaPredicted RBP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 BRCC3P46736 316 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 IKBKEQ14164 716 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 MFSD5Q6N075 450 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 UNC93AQ86WB7 457 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 UROC1Q96N76 676 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 OSGEPQ9NPF4 335 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 KANSL3Q9P2N6 904 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 LRFN2Q9ULH4 789 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 TIMM13Q9Y5L4 95 aaPredicted RBP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 A8MXQ7 604 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 O00370 1275 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 GABRDO14764 452 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 ATMINO43313 823 aaPredicted RBP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 VDRP11473 427 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 DENND1BQ6P3S1 775 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 TRIM72Q6ZMU5 477 aa24.71■■□□□ 1.55
TSEN54-201ENST00000333213 RNF10Q8N5U6 811 aaKnown RBP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 CTNNBL1Q8WYA6 563 aaPredicted RBP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.71■■□□□ 1.55
TSEN54-201ENST00000333213 ALPK3Q96L96 1907 aa24.7■■□□□ 1.55
TSEN54-201ENST00000333213 WARSP23381 471 aaKnown RBP24.7■■□□□ 1.54
TSEN54-201ENST00000333213 CDH5P33151 784 aaPredicted RBP24.7■■□□□ 1.54
TSEN54-201ENST00000333213 ABI1Q8IZP0 508 aa24.7■■□□□ 1.54
TSEN54-201ENST00000333213 C1orf131Q8NDD1 294 aaKnown RBP24.7■■□□□ 1.54
TSEN54-201ENST00000333213 CYTH4Q9UIA0 394 aa24.7■■□□□ 1.54
TSEN54-201ENST00000333213 COG5Q9UP83 839 aa24.7■■□□□ 1.54
TSEN54-201ENST00000333213 NCANO14594 1321 aa24.7■■□□□ 1.54
TSEN54-201ENST00000333213 PTP4A2Q12974 167 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 DCLRE1AQ6PJP8 1040 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 DSTYKQ6XUX3 929 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 MON1BQ7L1V2 547 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 NPAS4Q8IUM7 802 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 MCOLN2Q8IZK6 566 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 SLC35G2Q8TBE7 412 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 NRDE2Q9H7Z3 1164 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 LTBP2Q14767 1821 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 A0A0A6YYK5 440 aaPredicted RBP24.69■■□□□ 1.54
TSEN54-201ENST00000333213 MICAL2O94851 1124 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 ACRP10323 421 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 GPC5P78333 572 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 RNASELQ05823 741 aaKnown RBP24.69■■□□□ 1.54
TSEN54-201ENST00000333213 CNGA2Q16280 664 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 CCDC142Q17RM4 750 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 SGO2Q562F6 1265 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 PPP1R26Q5T8A7 1209 aaPredicted RBP24.69■■□□□ 1.54
TSEN54-201ENST00000333213 KIAA0319Q5VV43 1072 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 LLGL2Q6P1M3 1020 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 CRYBG2Q8N1P7 616 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 RFFLQ8WZ73 363 aa24.69■■□□□ 1.54
TSEN54-201ENST00000333213 MED7O43513 233 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 UPP2O95045 317 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 NSFP46459 744 aaKnown RBP24.68■■□□□ 1.54
TSEN54-201ENST00000333213 TMCO2Q7Z6W1 182 aaPredicted RBP24.68■■□□□ 1.54
TSEN54-201ENST00000333213 PHF13Q86YI8 300 aaPredicted RBP24.68■■□□□ 1.54
TSEN54-201ENST00000333213 RSPH1Q8WYR4 309 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 NOX5Q96PH1 765 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 LHX5Q9H2C1 402 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 SNX25Q9H3E2 840 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 FAM49BQ9NUQ9 324 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 KIAA1257Q9ULG3 409 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 PCDHGC5Q9Y5F6 944 aa24.68■■□□□ 1.54
TSEN54-201ENST00000333213 FNDC1Q4ZHG4 1894 aaPredicted RBP24.67■■□□□ 1.54
TSEN54-201ENST00000333213 M0QZQ0 153 aa24.67■■□□□ 1.54
TSEN54-201ENST00000333213 ATP2C2O75185 946 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms