RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 POLR3FQ9H1D9 316 aaPredicted RBP16.16■□□□□ 0.18
CTHRC1-201ENST00000330295 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
CTHRC1-201ENST00000330295 CCL26Q9Y258 94 aa16.16■□□□□ 0.18
CTHRC1-201ENST00000330295 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 SMIM28A0A1B0GU29 152 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 DGAT1O75907 488 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 WISP1O95388 367 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 EXOSC10Q01780 885 aaKnown RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 PRPF4BQ13523 1007 aaKnown RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 BYSLQ13895 437 aaKnown RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 PDGFRLQ15198 375 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 CC2D1AQ6P1N0 951 aaPredicted RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 TMEM92Q6UXU6 159 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 LRRC69Q6ZNQ3 347 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 GALNT15Q8N3T1 639 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 CPA6Q8N4T0 437 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 CCDC33Q8N5R6 958 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 FAM181AQ8N9Y4 354 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 DDX12PQ92771 950 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 KIF2CQ99661 725 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 ECT2Q9H8V3 914 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 PCOLCE2Q9UKZ9 415 aa16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 HELZP42694 1942 aaKnown RBP16.15■□□□□ 0.18
CTHRC1-201ENST00000330295 CCDC196A0A1B0GTZ2 297 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 AP5Z1O43299 807 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 HNRNPLP14866 589 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 CDC25CP30307 473 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 SEC13P55735 322 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 BFSP1Q12934 665 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 EPHA7Q15375 998 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 EEF1DP3Q658K8 133 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 MOXD1Q6UVY6 613 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 GPR155Q7Z3F1 870 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 ITIH5Q86UX2 942 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 RIN3Q8TB24 985 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 USP13Q92995 863 aaPredicted RBP16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 GCNAQ96QF7 691 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 TOR4AQ9NXH8 423 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 SLC27A5Q9Y2P5 690 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 SNX14Q9Y5W7 946 aa16.14■□□□□ 0.17
CTHRC1-201ENST00000330295 TEX15Q9BXT5 2789 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 TSC2P49815 1807 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 DKK1O94907 266 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 OR4Q2P0C623 313 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 AVPR1AP37288 418 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 EIF2S3P41091 472 aaKnown RBP16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 RCAN1P53805 252 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 RPL6Q02878 288 aaKnown RBP16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 CENPPQ6IPU0 288 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 IL21Q9HBE4 155 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 SLC38A7Q9NVC3 462 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 ZMYM5Q9UJ78 669 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 USP20Q9Y2K6 914 aa16.13■□□□□ 0.17
CTHRC1-201ENST00000330295 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 ANTXRLA6NF34 631 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 E9PAM4 449 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 K7EQS6 105 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 SLC37A4O43826 429 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 SOAT2O75908 522 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 MCM4P33991 863 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 ZNF33AQ06730 810 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 DEFB119Q8N690 84 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 PI4K2AQ9BTU6 479 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 TDP1Q9NUW8 608 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 PCDHB8Q9UN66 801 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 CYP46A1Q9Y6A2 500 aa16.12■□□□□ 0.17
CTHRC1-201ENST00000330295 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 KNTC1P50748 2209 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 ATMQ13315 3056 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 B8ZZF3 427 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 ATXN1LP0C7T5 689 aaKnown RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 HLA-EP13747 358 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 RPS6KB1P23443 525 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 YWHAHQ04917 246 aaPredicted RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 GPR17Q13304 367 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 TAF1BQ53T94 588 aaPredicted RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 XKR4Q5GH76 650 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms