RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 ATG4AQ8WYN0 398 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.81■□□□□ 0.28
PGBD2-201ENST00000329291 TMEM176AQ96HP8 235 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 LHX5Q9H2C1 402 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 FAM114A2Q9NRY5 505 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 CHST7Q9NS84 486 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 KLHL11Q9NVR0 708 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 GRHL1Q9NZI5 618 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
PGBD2-201ENST00000329291 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 RALAP11233 206 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 CYP3A5P20815 502 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 AKAP5P24588 427 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 SSR1P43307 286 aaKnown RBP16.8■□□□□ 0.28
PGBD2-201ENST00000329291 RPL21P46778 160 aaKnown RBP16.8■□□□□ 0.28
PGBD2-201ENST00000329291 TTMPQ5BVD1 217 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 CFAP58Q5T655 872 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 TXNRD3NBQ6F5E7 133 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 PPP1R2P3Q6NXS1 205 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 DNAJC24Q6P3W2 148 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 C12orf50Q8NA57 414 aaPredicted RBP16.8■□□□□ 0.28
PGBD2-201ENST00000329291 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
PGBD2-201ENST00000329291 CPXM1Q96SM3 734 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 RAB17Q9H0T7 212 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
PGBD2-201ENST00000329291 LRRC19Q9H756 370 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 TUBGCP4Q9UGJ1 667 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
PGBD2-201ENST00000329291 NDST1P52848 882 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 ADCY2Q08462 1091 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 ALKAL1Q6UXT8 129 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 APBB1IPQ7Z5R6 666 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 HEXIM2Q96MH2 286 aaKnown RBP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 FAM118BQ9BPY3 351 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 ARHGAP39Q9C0H5 1083 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 CYP3A43Q9HB55 503 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 IP6K2Q9UHH9 426 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 H0YGN5 161 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 PSTPIP1O43586 416 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 DUSP11O75319 330 aaKnown RBP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 MICAL2O94851 1124 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 RFC1P35251 1148 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 NOGQ13253 232 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 SNX17Q15036 470 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 SGO2Q562F6 1265 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 DCUN1D2Q6PH85 259 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 CCDC105Q8IYK2 499 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 JOSD2Q8TAC2 188 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 RNF25Q96BH1 459 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 FAXDC2Q96IV6 333 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 SNX27Q96L92 541 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 PLAAQ9Y263 795 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.79■□□□□ 0.28
PGBD2-201ENST00000329291 NFS1Q9Y697 457 aa16.79■□□□□ 0.28
PGBD2-201ENST00000329291 ERBB2P04626 1255 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 GNAT1P11488 350 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 MAN1A1P33908 653 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 DRG2P55039 364 aaKnown RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 PLTPP55058 493 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 KLF1Q13351 362 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 ZNF771Q7L3S4 317 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 DPH6Q7L8W6 267 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 TMC3Q7Z5M5 1100 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 CCDC50Q8IVM0 306 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 ARFGAP1Q8N6T3 406 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 C12orf29Q8N999 325 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 UBA3Q8TBC4 463 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 FBXO25Q8TCJ0 367 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 ACSF2Q96CM8 615 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 APOL6Q9BWW8 343 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 TRIP12Q14669 1992 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 MED7O43513 233 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 KPNA6O60684 536 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 PURAQ00577 322 aaKnown RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 DHX9Q08211 1270 aaKnown RBP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 TXLNGYQ9BZA5 131 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 LRRC4CQ9HCJ2 640 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 KLK14Q9P0G3 267 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.78■□□□□ 0.28
PGBD2-201ENST00000329291 CEP83Q9Y592 693 aa16.78■□□□□ 0.28
PGBD2-201ENST00000329291 TRIP11Q15643 1979 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms